RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZNF713Q8N859 430 aaPredicted RBP25.91■■□□□ 1.74
IRF3-201ENST00000309877 FTOQ9C0B1 505 aaKnown RBP eCLIP25.91■■□□□ 1.74
IRF3-201ENST00000309877 RTEL1Q9NZ71 1219 aa25.91■■□□□ 1.74
IRF3-201ENST00000309877 TCHHQ07283 1943 aa25.91■■□□□ 1.74
IRF3-201ENST00000309877 PNMA6FA0A0J9YX94 578 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 USP17L10C9JJH3 530 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 TMEM232C9JQI7 657 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 MBD3O95983 291 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 NAPAP54920 295 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 KLRG1Q96E93 195 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 GLIS2Q9BZE0 524 aaPredicted RBP25.9■■□□□ 1.74
IRF3-201ENST00000309877 GALNT17Q6IS24 598 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 ZKSCAN4Q969J2 545 aaPredicted RBP25.9■■□□□ 1.74
IRF3-201ENST00000309877 RCOR1Q9UKL0 485 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 FZD1Q9UP38 647 aa25.9■■□□□ 1.74
IRF3-201ENST00000309877 ZBTB5O15062 677 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 PRKG1Q13976 671 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 NPY5RQ15761 445 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 TPRNQ4KMQ1 711 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 KIAA1755Q5JYT7 1200 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 TYW1BQ6NUM6 668 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 PNMA8AQ86V59 439 aaPredicted RBP25.89■■□□□ 1.73
IRF3-201ENST00000309877 POLR3EQ9NVU0 708 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 PCDHA4Q9UN74 947 aa25.89■■□□□ 1.73
IRF3-201ENST00000309877 SSC5DA1L4H1 1573 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 GOLGA6L4A6NEF3 574 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 FAM83BQ5T0W9 1011 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 SYDE2Q5VT97 1194 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 BLIDQ8IZY5 108 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 GPT2Q8TD30 523 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 MTMR8Q96EF0 704 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 AS3MTQ9HBK9 375 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 CLIC4Q9Y696 253 aa25.88■■□□□ 1.73
IRF3-201ENST00000309877 PPP1R12BO60237 982 aaPredicted RBP25.87■■□□□ 1.73
IRF3-201ENST00000309877 STK38Q15208 465 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 RILPL1Q5EBL4 403 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 ANO1Q5XXA6 986 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 BTNL9Q6UXG8 535 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 DLK2Q6UY11 383 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 MYH15Q9Y2K3 1946 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 ATAD5Q96QE3 1844 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 POTECB2RU33 542 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 KIAA1683Q9H0B3 1180 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 C6orf50Q9HD87 102 aa25.87■■□□□ 1.73
IRF3-201ENST00000309877 USP2O75604 605 aaPredicted RBP25.86■■□□□ 1.73
IRF3-201ENST00000309877 YEATS4O95619 227 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 GNA11P29992 359 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 NF2P35240 595 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 NASPP49321 788 aaPredicted RBP25.86■■□□□ 1.73
IRF3-201ENST00000309877 STAT2P52630 851 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 DAGLBQ8NCG7 672 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 ZMYND12Q9H0C1 365 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 SCN4AP35499 1836 aa25.86■■□□□ 1.73
IRF3-201ENST00000309877 POLR2AP24928 1970 aaKnown RBP25.85■■□□□ 1.73
IRF3-201ENST00000309877 SMCO2A6NFE2 343 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 DCAF8L1A6NGE4 600 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 PTPRAP18433 802 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 SF3A1Q15459 793 aaKnown RBP25.85■■□□□ 1.73
IRF3-201ENST00000309877 CDC37Q16543 378 aaPredicted RBP25.85■■□□□ 1.73
IRF3-201ENST00000309877 LINC00301Q8NCQ3 95 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 CHURC1Q8WUH1 139 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 TNFRSF25Q93038 417 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 COA7Q96BR5 231 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 WDR18Q9BV38 432 aa25.85■■□□□ 1.73
IRF3-201ENST00000309877 NOL7Q9UMY1 257 aaKnown RBP25.85■■□□□ 1.73
IRF3-201ENST00000309877 QRICH1Q2TAL8 776 aa25.84■■□□□ 1.73
IRF3-201ENST00000309877 NOL9Q5SY16 702 aaKnown RBP25.84■■□□□ 1.73
IRF3-201ENST00000309877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.84■■□□□ 1.734e-6■■■■□ 20.6
IRF3-201ENST00000309877 KCNG4Q8TDN1 519 aa25.84■■□□□ 1.73
IRF3-201ENST00000309877 LPAR1Q92633 364 aa25.84■■□□□ 1.73
IRF3-201ENST00000309877 CLEC11AQ9Y240 323 aa25.84■■□□□ 1.73
IRF3-201ENST00000309877 USP14P54578 494 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 MAP3K9P80192 1104 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 PPP1R18Q6NYC8 613 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 BICD2Q8TD16 824 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 CDCA5Q96FF9 252 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 GZF1Q9H116 711 aaPredicted RBP25.83■■□□□ 1.73
IRF3-201ENST00000309877 WDR90Q96KV7 1748 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 ESYT2A0FGR8 921 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 PPP1R11O60927 126 aaPredicted RBP25.83■■□□□ 1.73
IRF3-201ENST00000309877 ME1P48163 572 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 SPP2Q13103 211 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 PIK3AP1Q6ZUJ8 805 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 FAM160B2Q86V87 743 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 ZNF280CQ8ND82 737 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 FEM1BQ9UK73 627 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 PRR12Q9ULL5 1215 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 ZHX2Q9Y6X8 837 aa25.83■■□□□ 1.73
IRF3-201ENST00000309877 DOCK1Q14185 1865 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 SPTLC2O15270 562 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 PLA2G6O60733 806 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 ATP2B1P20020 1258 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 IREB2P48200 963 aaKnown RBP25.82■■□□□ 1.72
IRF3-201ENST00000309877 TOB1P50616 345 aaPredicted RBP25.82■■□□□ 1.72
IRF3-201ENST00000309877 MTMR2Q13614 643 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 SLC39A14Q15043 492 aa25.82■■□□□ 1.72
IRF3-201ENST00000309877 EARS2Q5JPH6 523 aaKnown RBP25.82■■□□□ 1.72
IRF3-201ENST00000309877 CCDC194A0A1B0GVG4 234 aa25.81■■□□□ 1.72
IRF3-201ENST00000309877 FAM205CA6NFA0 338 aa25.81■■□□□ 1.72
IRF3-201ENST00000309877 WDR46O15213 610 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms