RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TRIM47Q96LD4 638 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 RAB21Q9UL25 225 aa18.67■□□□□ 0.58
SSH3-201ENST00000308127 NUP98P52948 1817 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 SCG2P13521 617 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 IL6STP40189 918 aaPredicted RBP18.66■□□□□ 0.58
SSH3-201ENST00000308127 CRKLP46109 303 aaKnown RBP18.66■□□□□ 0.58
SSH3-201ENST00000308127 HERVK_113P62684 666 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 TAF1P21675 1872 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.66■□□□□ 0.58
SSH3-201ENST00000308127 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 GTPBP6O43824 516 aaPredicted RBP18.66■□□□□ 0.58
SSH3-201ENST00000308127 PRDX5P30044 214 aa18.66■□□□□ 0.58
SSH3-201ENST00000308127 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 AMPD2Q01433 879 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 INF2Q27J81 1249 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 ANKRD20A12PQ8NF67 263 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 EXOC4Q96A65 974 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 DYNLL2Q96FJ2 89 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 SMARCAL1Q9NZC9 954 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 GOLGA8HP0CJ92 632 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 MYBL2P10244 700 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 ZNF658Q5TYW1 1059 aaPredicted RBP18.65■□□□□ 0.58
SSH3-201ENST00000308127 INTS5Q6P9B9 1019 aaKnown RBP18.65■□□□□ 0.58
SSH3-201ENST00000308127 WDR59Q6PJI9 974 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 KIAA1328Q86T90 577 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 FAM204AQ9H8W3 233 aa18.65■□□□□ 0.58
SSH3-201ENST00000308127 LUC7L2Q9Y383 392 aaKnown RBP18.65■□□□□ 0.58
SSH3-201ENST00000308127 MYO1CO00159 1063 aa18.64■□□□□ 0.58
SSH3-201ENST00000308127 USP17L8P0C7I0 530 aa18.64■□□□□ 0.58
SSH3-201ENST00000308127 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.58
SSH3-201ENST00000308127 ERVV-1B6SEH8 477 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 PLEKP08567 350 aaPredicted RBP18.64■□□□□ 0.57
SSH3-201ENST00000308127 ACTN2P35609 894 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 MATR3P43243 847 aaKnown RBP eCLIP18.64■□□□□ 0.57
SSH3-201ENST00000308127 ERFEQ4G0M1 354 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 NAALADL2Q58DX5 795 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 HSP90B2PQ58FF3 399 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 RSPH14Q9UHP6 348 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
SSH3-201ENST00000308127 LEKR1Q6ZMV7 388 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 MB21D1Q8N884 522 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
SSH3-201ENST00000308127 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
SSH3-201ENST00000308127 BCL9O00512 1426 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 USP5P45974 858 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 ATP2B2Q01814 1243 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 C2orf54Q08AI8 447 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 EXOC5O00471 708 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 NTSR2O95665 410 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 TRIM21P19474 475 aaKnown RBP18.63■□□□□ 0.57
SSH3-201ENST00000308127 MECOMQ03112 1051 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 WHAMMP3Q1A5X7 153 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 OR8K1Q8NGG5 319 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 EHD2Q9NZN4 543 aa18.63■□□□□ 0.57
SSH3-201ENST00000308127 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 PDE2AO00408 941 aaPredicted RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 PPARDQ03181 441 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 ITPK1Q13572 414 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 EZH2Q15910 746 aaKnown RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 HEATR3Q7Z4Q2 680 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 SLC44A5Q8NCS7 719 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 HNRNPLLQ8WVV9 542 aaKnown RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 FAM84BQ96KN1 310 aaPredicted RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 FCER1AP12319 257 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 GOLGA5Q8TBA6 731 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 JADE2Q9NQC1 790 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 RRP15Q9Y3B9 282 aaKnown RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 MYH13Q9UKX3 1938 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 CICQ96RK0 1608 aaPredicted RBP18.62■□□□□ 0.57
SSH3-201ENST00000308127 TIAM2Q8IVF5 1701 aa18.62■□□□□ 0.57
SSH3-201ENST00000308127 LRRC10BA6NIK2 292 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 SEMA3EO15041 775 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 RNF40O75150 1001 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 DNA2P51530 1060 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 DISC1Q9NRI5 854 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 CXCR5P32302 372 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 MUM1L1Q5H9M0 696 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 BLIDQ8IZY5 108 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 ADSSL1Q8N142 457 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
SSH3-201ENST00000308127 UBA7P41226 1012 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms