RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 C9orf78Q9NZ63 289 aaPredicted RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 CNTN3Q9P232 1028 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 GRIN2DO15399 1336 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 ROCK1Q13464 1354 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 PIK3C2GO75747 1445 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 TMEM127O75204 238 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 CD44P16070 742 aaKnown RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 PCSK2P16519 638 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 MX1P20591 662 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 NFE2Q16621 373 aaPredicted RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 RBM43Q6ZSC3 357 aaKnown RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 CCAR2Q8N163 923 aaKnown RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 CCDC112Q8NEF3 446 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 PLEKHF1Q96S99 279 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 PARP3Q9Y6F1 533 aa3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 ZNF335Q9H4Z2 1342 aaPredicted RBP3.68□□□□□ -1.82
RAPGEF6-202ENST00000308008 MYO1FO00160 1098 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 ZEB2O60315 1214 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 FZD6O60353 706 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 DIAPH1O60610 1272 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SHOX2O60902 331 aaPredicted RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TIPRLO75663 272 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 RASSF9O75901 435 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SYF2O95926 243 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PTK2Q05397 1052 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 ST3GAL1Q11201 340 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SERINC3Q13530 473 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SEZ6Q53EL9 994 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 RC3H1Q5TC82 1133 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 RELL1Q8IUW5 271 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SKA1Q96BD8 255 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRIM56Q9BRZ2 755 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 KIF9Q9HAQ2 790 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 JADE2Q9NQC1 790 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRAK1Q9UPV9 953 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 DMTF1Q9Y222 760 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 LUC7L2Q9Y383 392 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 MAGED1Q9Y5V3 778 aaPredicted RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SPDYE3A6NKU9 549 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGA6L6A8MZA4 724 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 B2RBV5 119 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PIP5K1CO60331 668 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 CFHP08603 1231 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SLC10A3P09131 477 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRIM27P14373 513 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 GCFC2P16383 781 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TNFAIP3P21580 790 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SOX5P35711 763 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 HALP42357 657 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 IQCB1Q15051 598 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PTPN21Q16825 1174 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 BEND6Q5SZJ8 279 aaPredicted RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 TEX11Q8IYF3 940 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 OR8K1Q8NGG5 319 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 COG1Q8WTW3 980 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SLC7A3Q8WY07 619 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PLEKHG4BQ96PX9 1271 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 CARD11Q9BXL7 1154 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 LUZP4Q9P127 313 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 GTF2A1LQ9UNN4 478 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 GJA3Q9Y6H8 435 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGB1Q14789 3259 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SLC27A2O14975 620 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SMC2O95347 1197 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SLU7O95391 586 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 NUCB2P80303 420 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 DSC3Q14574 896 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 CLUL1Q15846 466 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 JAKMIP3Q5VZ66 844 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 CLASRPQ8N2M8 674 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PPHLN1Q8NEY8 458 aaKnown RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 CTCFLQ8NI51 663 aaPredicted RBP3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 ANKZF1Q9H8Y5 726 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 SUN2Q9UH99 717 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 PALD1Q9ULE6 856 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 NEDD4P46934 1319 aa3.67□□□□□ -1.82
RAPGEF6-202ENST00000308008 ALG1L2C9J202 215 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 IPO7O95373 1038 aaKnown RBP3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 PECAM1P16284 738 aaPredicted RBP3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 PLCG2P16885 1265 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 MAGEA8P43361 318 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 ZNF75DP51815 510 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 NEK2P51955 445 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 NEK4P51957 841 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 ALFQ53S48 1182 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 SNAP47Q5SQN1 464 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 THEMIS2Q5TEJ8 643 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 VPS53Q5VIR6 699 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 GK5Q6ZS86 529 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 FAM47EQ6ZV65 393 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 BTN2A1Q7KYR7 527 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 WDR66Q8TBY9 1149 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 SRCIN1Q9C0H9 1055 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 FBRSQ9HAH7 460 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 CNPY2Q9Y2B0 182 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 TTC21BQ7Z4L5 1316 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 NEBLO76041 1014 aa3.66□□□□□ -1.82
RAPGEF6-202ENST00000308008 NUDT7P0C024 238 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms