RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 H7C1D1 291 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 TBC1D8O95759 1140 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 PSMD6Q15008 389 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 SEPT14Q6ZU15 432 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 TRIM6Q9C030 488 aaPredicted RBP18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 A0A1W2PQ27 194 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 A0A1W2PQ64 194 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 A0A1W2PQD8 194 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 TGFBRAP1Q8WUH2 860 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 CFAP57Q96MR6 1250 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 VPS37BQ9H9H4 285 aa18.14■□□□□ 0.49
SH3RF1-201ENST00000284637 TCP1P17987 556 aaKnown RBP18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 IFT88Q13099 833 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 GEN1Q17RS7 908 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 TMEM87AQ8NBN3 555 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 IQCDQ96DY2 449 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 GLT8D2Q9H1C3 349 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 ZMYND10O75800 440 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 PDE6AP16499 860 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 STAT1P42224 750 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 ANKRD20A3Q5VUR7 823 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 MYOCDQ8IZQ8 938 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 SYMPKQ92797 1274 aaKnown RBP18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 TNKSO95271 1327 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 MROH5Q6ZUA9 1318 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 RPUSD2Q8IZ73 545 aaKnown RBP18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 FAM114A2Q9NRY5 505 aa18.13■□□□□ 0.49
SH3RF1-201ENST00000284637 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 CYP21A2P08686 494 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 XRCC5P13010 732 aaKnown RBP18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 VPS41P49754 854 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 ITIH3Q06033 890 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 TRPC3Q13507 836 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 LZTS2Q9BRK4 669 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 SLC39A2Q9NP94 309 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 GAS8O95995 478 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 PTGDRQ13258 359 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 ZSCAN10Q96SZ4 725 aaPredicted RBP18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 EXOC7Q9UPT5 735 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 TXNDC9O14530 226 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 GTPBP6O43824 516 aaPredicted RBP18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 CYP2C19P33261 490 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 RASSF2P50749 326 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 GUCY2DQ02846 1103 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 PPP2R5DQ14738 602 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 SLC39A14Q15043 492 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 MUM1Q2TAK8 710 aa18.12■□□□□ 0.49
SH3RF1-201ENST00000284637 RPN1P04843 607 aaKnown RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 COPB1P53618 953 aaKnown RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 CNBD1Q8NA66 436 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 KDRP35968 1356 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 PHLDB2Q86SQ0 1253 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 ARHGAP24Q8N264 748 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 FNBP4Q8N3X1 1017 aaPredicted RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 MAGI2Q86UL8 1455 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 CFBP00751 764 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 MYCLP12524 364 aaPredicted RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 CLEC17AQ6ZS10 378 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 ZNF589Q86UQ0 364 aaPredicted RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 RAB3IPQ96QF0 476 aaPredicted RBP18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 EYA3Q99504 573 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 GPBP1Q86WP2 473 aa18.11■□□□□ 0.49
SH3RF1-201ENST00000284637 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 ABCC10Q5T3U5 1492 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 CYP2J2P51589 502 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 TPH2Q8IWU9 490 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 SMYD4Q8IYR2 804 aaPredicted RBP18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 NT5C3AQ9H0P0 336 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 ACTR5Q9H9F9 607 aaPredicted RBP18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 DBNLQ9UJU6 430 aaKnown RBP18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 IFNB1P01574 187 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 CD19P15391 556 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 STRN3Q13033 797 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 LARGE1O95461 756 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 GNA14O95837 355 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 EHHADHQ08426 723 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 TPX2Q9ULW0 747 aaKnown RBP18.1■□□□□ 0.49
SH3RF1-201ENST00000284637 B4DLN1 442 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 I3L4J1 428 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms