RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TFRCP02786 760 aaKnown RBP18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 BMP6P22004 513 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MMS22LQ6ZRQ5 1243 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CLIC6Q96NY7 704 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MKRN1Q9UHC7 482 aaKnown RBP18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 HPSEQ9Y251 543 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RHOXF2BP0C7M4 288 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 TRIM29Q14134 588 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RTN1Q16799 776 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RHOXF2Q9BQY4 288 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
MAP1LC3B-201ENST00000268607 BTBD18B2RXH4 712 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 FOXN1O15353 648 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 EIF3JO75822 258 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 GSCP56915 257 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SWT1Q5T5J6 900 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SP8Q8IXZ3 490 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CCDC102AQ96A19 550 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 KCNG1Q9UIX4 513 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DOCK2Q92608 1830 aa18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DZIP1Q86YF9 867 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ZC3H12CQ9C0D7 883 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-201ENST00000268607 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 USP17L21D6R901 530 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CCDC175P0C221 793 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ALDH1B1P30837 517 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 USP5P45974 858 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MICALL1Q8N3F8 863 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RAB21Q9UL25 225 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 COL11A2P13942 1736 aaPredicted RBP17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ERLIN1O75477 346 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 TNKSO95271 1327 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SLX4Q8IY92 1834 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 NFE2L3Q9Y4A8 694 aa17.99■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DPEP1P16444 411 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 FMR1Q06787 632 aaKnown RBP eCLIP17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 EFCAB13Q8IY85 973 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RNF41Q9H4P4 317 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CHD4Q14839 1912 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 G3V3G9 751 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MYO1BO43795 1136 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SCNN1DP51172 638 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 VSNL1P62760 191 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CASP8Q14790 479 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 TADA2BQ86TJ2 420 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CEP112Q8N8E3 955 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MSANTD4Q8NCY6 345 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 PCDHAC2Q9Y5I4 1007 aa17.98■□□□□ 0.47
MAP1LC3B-201ENST00000268607 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 IFNAR1P17181 557 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 NMT2O60551 498 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CPP00450 1065 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CYP2D6P10635 497 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 MAP2K2P36507 400 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 NR5A1Q13285 461 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 AOC3Q16853 763 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 HSP90B2PQ58FF3 399 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ZNF569Q5MCW4 686 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DHX37Q8IY37 1157 aaKnown RBP17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ESR2Q92731 530 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DONSONQ9NYP3 566 aa17.97■□□□□ 0.47
MAP1LC3B-201ENST00000268607 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RAD9BQ6WBX8 426 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 KIF5CO60282 957 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 PTPAQ15257 358 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 RESP18Q5W5W9 173 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 DIS3L2Q8IYB7 885 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ANKRD20A12PQ8NF67 263 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SAMSN1Q9NSI8 373 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 SUFUQ9UMX1 484 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 ADGRG1Q9Y653 693 aa17.96■□□□□ 0.47
MAP1LC3B-201ENST00000268607 OXER1Q8TDS5 423 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 KCNH3Q9ULD8 1083 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 LRRIQ3A6PVS8 624 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PPP6R2O75170 966 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ZNF18P17022 549 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms