RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MFAP3LO75121 409 aa18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 BAG3O95817 575 aa18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 LRRC41Q15345 812 aa18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 BUB1O43683 1085 aa18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 HSPA1LP34931 641 aa18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 SND1Q7KZF4 910 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 FRMPD2Q68DX3 1309 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 ERCC5P28715 1186 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 MAATS1Q7Z4T9 603 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 CABP7Q86V35 215 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 CTDP1Q9Y5B0 961 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 PLA2G4AP47712 749 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 KRT83P78385 493 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 FOXP2O15409 715 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 RRAGAQ7L523 313 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 GSDMAQ96QA5 445 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 SAR1BQ9Y6B6 198 aa18.11■□□□□ 0.49
PDZRN3-201ENST00000263666 TRAF5O00463 557 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 EVX2Q03828 476 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 NTRK3Q16288 839 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 LRP10Q7Z4F1 713 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 FAM217BQ9NTX9 383 aaPredicted RBP18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 TACC1O75410 805 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 CSF1RP07333 972 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 TAF4BQ92750 862 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 ZC3H12CQ9C0D7 883 aaKnown RBP18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 PRCPP42785 496 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 IQCEQ6IPM2 695 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 ADAM21Q9UKJ8 722 aa18.1■□□□□ 0.49
PDZRN3-201ENST00000263666 RNF187Q5TA31 235 aaPredicted RBP18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 SRP68Q9UHB9 627 aaKnown RBP18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 GTPBP6O43824 516 aaPredicted RBP18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 N4BP1O75113 896 aaKnown RBP18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 AMPD3Q01432 767 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 STAG1Q8WVM7 1258 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 ALS2CR12Q96Q35 445 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 TSG101Q99816 390 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 KANSL2Q9H9L4 492 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 HPSEQ9Y251 543 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 MRFAP1Q9Y605 127 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 SLC7A5Q01650 507 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 MECOMQ03112 1051 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 ADGRA1Q86SQ6 560 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 TEX11Q8IYF3 940 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
PDZRN3-201ENST00000263666 AKAP12Q02952 1782 aa18.08■□□□□ 0.49
PDZRN3-201ENST00000263666 TUBGCP2Q9BSJ2 902 aa18.08■□□□□ 0.49
PDZRN3-201ENST00000263666 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.49
PDZRN3-201ENST00000263666 INTS13Q9NVM9 706 aa18.08■□□□□ 0.49
PDZRN3-201ENST00000263666 SMCO2A6NFE2 343 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF76P36508 570 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 C2orf54Q08AI8 447 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 RAPGEF1Q13905 1077 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 USP17L2Q6R6M4 530 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 MICALL1Q8N3F8 863 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 L2HGDHQ9H9P8 463 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 C6orf50Q9HD87 102 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 VEGFAP15692 232 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 VSNL1P62760 191 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 TRIM65Q6PJ69 517 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 LRRC47Q8N1G4 583 aaKnown RBP18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 RIN2Q8WYP3 895 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 FAM204AQ9H8W3 233 aa18.08■□□□□ 0.48
PDZRN3-201ENST00000263666 A0A087X0B3 334 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 TTC26A0AVF1 554 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 KLRF2D3W0D1 207 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 KRT26Q7Z3Y9 468 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 FCHSD1Q86WN1 690 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 LDHCP07864 332 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 SPAG5Q96R06 1193 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 CEP89Q96ST8 783 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 CKAP4Q07065 602 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 BRD3Q15059 726 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 FAM114A1Q8IWE2 563 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 NOA1Q8NC60 698 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 RRP36Q96EU6 259 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 LRWD1Q9UFC0 647 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 JCADQ9P266 1359 aa18.07■□□□□ 0.48
PDZRN3-201ENST00000263666 KIAA0754O94854 1291 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 NDUFA10O95299 355 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 KLRK1P26718 216 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 MAGEA1P43355 309 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 KCTD16Q68DU8 428 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms