RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF215Q9UL58 517 aaPredicted RBP17.48■□□□□ 0.39
SHANK3-201ENST00000262795 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 GLT8D2Q9H1C3 349 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 NEMFO60524 1076 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 SPAG1Q07617 926 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 ATRIPQ8WXE1 791 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 CPSF3Q9UKF6 684 aaKnown RBP17.48■□□□□ 0.39
SHANK3-201ENST00000262795 KRT83P78385 493 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 TFDP1Q14186 410 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 PAXBP1Q9Y5B6 917 aa17.48■□□□□ 0.39
SHANK3-201ENST00000262795 KRT86O43790 486 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 PDE1CQ14123 709 aaPredicted RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 DSTYKQ6XUX3 929 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 RPUSD2Q8IZ73 545 aaKnown RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ADD3Q9UEY8 706 aaKnown RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ZHX2Q9Y6X8 837 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 C17orf53Q8N3J3 647 aaPredicted RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ANAPC5Q9UJX4 755 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ZNF513Q8N8E2 541 aaPredicted RBP17.47■□□□□ 0.39
SHANK3-201ENST00000262795 IFNKQ9P0W0 207 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 SLC27A2O14975 620 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
SHANK3-201ENST00000262795 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 LUC7L2Q9Y383 392 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CTAGE15A4D2H0 777 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CTAGE8P0CG41 777 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 ABCB4P21439 1286 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CTAGE6Q86UF2 777 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CTAGE4Q8IX94 777 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 SLC8A2Q9UPR5 921 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 TRIM56Q9BRZ2 755 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 MTRF1LQ9UGC7 380 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 GPATCH8Q9UKJ3 1502 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 PTPREP23469 700 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 RNF219Q5W0B1 726 aaPredicted RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 NSRP1Q9H0G5 558 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 SCAF8Q9UPN6 1271 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 BCRP11274 1271 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 YWHAEP62258 255 aaKnown RBP17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CCDC186Q7Z3E2 898 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 PHLDB2Q86SQ0 1253 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 FAM149B1Q96BN6 582 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 SMYD2Q9NRG4 433 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 KCNH4Q9UQ05 1017 aa17.46■□□□□ 0.39
SHANK3-201ENST00000262795 CASP2P42575 452 aa17.46■□□□□ 0.38
SHANK3-201ENST00000262795 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 F13A1P00488 732 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 ARMCX5Q6P1M9 558 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
SHANK3-201ENST00000262795 SBNO1A3KN83 1393 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 NXNQ6DKJ4 435 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 SMIM5Q71RC9 77 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 NEMP1O14524 444 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 ACBD5Q5T8D3 534 aaPredicted RBP17.45■□□□□ 0.38
SHANK3-201ENST00000262795 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 BMP2KLQ5H9B9 411 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 IL16Q14005 1332 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 CAPN2P17655 700 aa17.45■□□□□ 0.38
SHANK3-201ENST00000262795 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 ANKRD36BP1Q96IX9 119 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 PCDHA12Q9UN75 941 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 KLRF2D3W0D1 207 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 SCARA5Q6ZMJ2 495 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 CCDC68Q9H2F9 335 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 GSTA1P08263 222 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 GSTA2P09210 222 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 UBL4BQ8N7F7 174 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 IBTKQ9P2D0 1353 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 SRGAP1Q7Z6B7 1085 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 GPR161Q8N6U8 529 aaKnown RBP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 CDC26Q8NHZ8 85 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-201ENST00000262795 NPR1P16066 1061 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 HSPA4P34932 840 aa17.44■□□□□ 0.38
SHANK3-201ENST00000262795 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 RPS6KB1P23443 525 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms