RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 LY9Q9HBG7 655 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 DLC1Q96QB1 1528 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 B4GALNT4Q76KP1 1039 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 MB21D2Q8IYB1 491 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 REXO1Q8N1G1 1221 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 UHMK1Q8TAS1 419 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 FAM204AQ9H8W3 233 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 RIMS1Q86UR5 1692 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 ZBTB22O15209 634 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 KRT13P13646 458 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 RFC4P35249 363 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CERS3Q8IU89 383 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 TNNC1P63316 161 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 RASSF7Q02833 373 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 GUCY2DQ02846 1103 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 UBE4AQ14139 1066 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CNOT6LQ96LI5 555 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.13□□□□□ -1.591e-7■■■■□ 22
VPS13C-201ENST00000249837 KCTD16Q68DU8 428 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 ADAT2Q7Z6V5 191 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 FAM71BQ8TC56 605 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 PPM1EQ8WY54 764 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CAPN7Q9Y6W3 813 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 USP32Q8NFA0 1604 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 GJC1P36383 396 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CETN1Q12798 172 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 KRT25Q7Z3Z0 450 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 LRRC47Q8N1G4 583 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 KCNK9Q9NPC2 374 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 PPANQ9NQ55 473 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 ZSCAN20P17040 1043 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PLCG1P19174 1290 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 EHHADHQ08426 723 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CUL4BQ13620 913 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ANKARQ7Z5J8 1434 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 SRGAP2O75044 1071 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TNFAIP3P21580 790 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 GSPT2Q8IYD1 628 aaKnown RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 U2AF1L4Q8WU68 220 aaKnown RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CETN2P41208 172 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TNIP1Q15025 636 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ENGASEQ8NFI3 743 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 EYA3Q99504 573 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 NYXQ9GZU5 481 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 HDAC6Q9UBN7 1215 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ADAM21Q9UKJ8 722 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 HGSO14964 777 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 USP17L8P0C7I0 530 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ACTN2P35609 894 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ANTXR2P58335 489 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 RASGRF1Q13972 1273 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 KRT71Q3SY84 523 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CFAP221Q4G0U5 840 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PARP10Q53GL7 1025 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 NCAPH2Q6IBW4 605 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CC2D1AQ6P1N0 951 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 METTL16Q86W50 562 aaKnown RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 BPIFA3Q9BQP9 254 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 LZTS2Q9BRK4 669 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TSGA10Q9BZW7 698 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 NEDD4P46934 1319 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 GBP2P32456 591 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PDIA6Q15084 440 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 USPL1Q5W0Q7 1092 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 LMBR1Q8WVP7 490 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 DPH5Q9H2P9 285 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ZBTB21Q9ULJ3 1066 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TMEM131LA2VDJ0 1609 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 POTEJP0CG39 1038 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 LONP1P36776 959 aaKnown RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PEX26Q7Z412 305 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 GOLGA5Q8TBA6 731 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CPVLQ9H3G5 476 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 HYOU1Q9Y4L1 999 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ADGRG1Q9Y653 693 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 FRMPD1Q5SYB0 1578 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 GNPATO15228 680 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 BUB1O43683 1085 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 RPS6KA1Q15418 735 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CEP85LQ5SZL2 805 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 EXOC4Q96A65 974 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 KRT12Q99456 494 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 MROH1Q8NDA8 1641 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ANKRD26Q9UPS8 1709 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CETN3O15182 167 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CHRNDQ07001 517 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 NAA35Q5VZE5 725 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 MAEAQ7L5Y9 396 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 HPS3Q969F9 1004 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 CHP1Q99653 195 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 KCNQ4P56696 695 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 IRX3P78415 501 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 GRIN1Q05586 938 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TUBGCP2Q9BSJ2 902 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 NCAPD2Q15021 1401 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 UBN2Q6ZU65 1347 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 SPDYE3A6NKU9 549 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 EEF2P13639 858 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms