RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 B4GALNT4Q76KP1 1039 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 VSIG1Q86XK7 387 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 ZNF654Q8IZM8 581 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 TUBB2BQ9BVA1 445 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 HESX1Q9UBX0 185 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 ICA1Q05084 483 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 PLA2G4DQ86XP0 818 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 ANKRD42Q8N9B4 389 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 MIPOL1Q8TD10 442 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 PARD3BQ8TEW8 1205 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 CHMP6Q96FZ7 201 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 IRAK4Q9NWZ3 460 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 UGGT2Q9NYU1 1516 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-201ENST00000225964 KRBA2Q6ZNG9 492 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 CBX8Q9HC52 389 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
COL1A1-201ENST00000225964 CLRN2A0PK11 232 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 GSTA1P08263 222 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 GSTA2P09210 222 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 IL13P35225 146 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 KAZNQ674X7 775 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 CDC37L1Q7L3B6 337 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 TMTC1Q8IUR5 882 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 AP5M1Q9H0R1 490 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 NRBP2Q9NSY0 501 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 SLAIN2Q9P270 581 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 BCAMP50895 628 aa14.56□□□□□ -0.08
COL1A1-201ENST00000225964 PDZD4Q76G19 769 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-201ENST00000225964 PFDN6O15212 129 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 XPAP23025 273 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 BLIDQ8IZY5 108 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 HAUS1Q96CS2 278 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PARP2Q9UGN5 583 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PCDHA12Q9UN75 941 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 JAK2O60674 1132 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PTPROQ16827 1216 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 MYOCDQ8IZQ8 938 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 TAB3Q8N5C8 712 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 CARD6Q9BX69 1037 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 BUB1BO60566 1050 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PHBP35232 272 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 STAT1P42224 750 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PRPSAP1Q14558 356 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 ARMCX5Q6P1M9 558 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 POMGNT1Q8WZA1 660 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 GPKOWQ92917 476 aaPredicted RBP eCLIP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 IFIH1Q9BYX4 1025 aaKnown RBP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 ERVV-2B6SEH9 535 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 KIF3CO14782 793 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 IFNB1P01574 187 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PAK2Q13177 524 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 ABCB5Q2M3G0 1257 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 CCDC68Q9H2F9 335 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 DISC1Q9NRI5 854 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 RTEL1Q9NZ71 1219 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 NEURL1BA8MQ27 555 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 S100BP04271 92 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL1A1-201ENST00000225964 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 CAPN12Q6ZSI9 719 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 ARHGAP24Q8N264 748 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 NCAPGQ9BPX3 1015 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 CARD14Q9BXL6 1004 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 NFE2L3Q9Y4A8 694 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 HOXB7P09629 217 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 RAB17Q9H0T7 212 aa14.55□□□□□ -0.08
COL1A1-201ENST00000225964 TYW5A2RUC4 315 aaKnown RBP14.54□□□□□ -0.08
COL1A1-201ENST00000225964 TMEM232C9JQI7 657 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
COL1A1-201ENST00000225964 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 P3H4Q92791 437 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 ANAPC5Q9UJX4 755 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 MTMR3Q13615 1198 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 NUCKS1Q9H1E3 243 aaKnown RBP14.54□□□□□ -0.08
COL1A1-201ENST00000225964 IPO11Q9UI26 975 aaKnown RBP14.54□□□□□ -0.08
COL1A1-201ENST00000225964 KRT3P12035 628 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 CROCCP2Q86T23 111 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 KDM2BQ8NHM5 1336 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 NDUFAB1O14561 156 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 N4BP1O75113 896 aaKnown RBP14.54□□□□□ -0.08
COL1A1-201ENST00000225964 TFDP1Q14186 410 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 PPP2R5AQ15172 486 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 RINT1Q6NUQ1 792 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 GRK7Q8WTQ7 553 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 DSCC1Q9BVC3 393 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 ADCY8P40145 1251 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 C10orf67Q8IYJ2 551 aa14.54□□□□□ -0.08
COL1A1-201ENST00000225964 H0YCG3 227 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 ZNF75DP51815 510 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 ARPP19P56211 112 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 RNASELQ05823 741 aaKnown RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 METTL23Q86XA0 190 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms