RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 MORC3Q14149 939 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 TMTC3Q6ZXV5 915 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 NAA15Q9BXJ9 866 aaKnown RBP14.65□□□□□ -0.06
HDAC7-201ENST00000080059 KCNJ18B7U540 433 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 NTSR2O95665 410 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 CASP1P29466 404 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 KCNJ12Q14500 433 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 LINC00116Q8NCU8 138 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 SUPT20HQ8NEM7 779 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 TBCKQ8TEA7 893 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 TCHPQ9BT92 498 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 SAMSN1Q9NSI8 373 aaKnown RBP14.65□□□□□ -0.06
HDAC7-201ENST00000080059 AK9Q5TCS8 1911 aa14.65□□□□□ -0.06
HDAC7-201ENST00000080059 PTPREP23469 700 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 TAX1BP1Q86VP1 789 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-201ENST00000080059 MAN1B1Q9UKM7 699 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 CKAP4Q07065 602 aaKnown RBP14.64□□□□□ -0.07
HDAC7-201ENST00000080059 TRIM14Q14142 442 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 SF3B3Q15393 1217 aaKnown RBP14.64□□□□□ -0.07
HDAC7-201ENST00000080059 NIM1KQ8IY84 436 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 TBC1D5Q92609 795 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 TSPYL1Q9H0U9 437 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 NLRC4Q9NPP4 1024 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 IFT172Q9UG01 1749 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 WDR19Q8NEZ3 1342 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 BACH1O14867 736 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 U2AF2P26368 475 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC7-201ENST00000080059 CASP7P55210 303 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 IGDCC4Q8TDY8 1250 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 BCL2L12Q9HB09 334 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 NCOA3Q9Y6Q9 1424 aa14.64□□□□□ -0.07
HDAC7-201ENST00000080059 IKBKBO14920 756 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 GDF11O95390 407 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 CTDNEP1O95476 244 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 TTLL1O95922 423 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 MYCLP12524 364 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 PPP2R3AQ06190 1150 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 CTNNBL1Q8WYA6 563 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 TERF1P54274 439 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 ETF1P62495 437 aaKnown RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
HDAC7-201ENST00000080059 ZNF215Q9UL58 517 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-201ENST00000080059 CCDC172P0C7W6 258 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 CYP4A11Q02928 519 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 FBXO11Q86XK2 927 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 TPH2Q8IWU9 490 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 TMEM47Q9BQJ4 181 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 GOPCQ9HD26 462 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 PNPLA7Q6ZV29 1317 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-201ENST00000080059 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.072e-7■■■■□ 25.5
HDAC7-201ENST00000080059 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
HDAC7-201ENST00000080059 INTS5Q6P9B9 1019 aaKnown RBP14.62□□□□□ -0.07
HDAC7-201ENST00000080059 DDX25Q9UHL0 483 aaKnown RBP14.62□□□□□ -0.07
HDAC7-201ENST00000080059 H7C1D1 291 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 OR8K1Q8NGG5 319 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 NT5C3AQ9H0P0 336 aa14.62□□□□□ -0.07
HDAC7-201ENST00000080059 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
HDAC7-201ENST00000080059 PHACTR2O75167 634 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 WDHD1O75717 1129 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 ERCC5P28715 1186 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 IFI16Q16666 785 aaKnown RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 TMC4Q7Z404 712 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 PSMB7Q99436 277 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 ARHGEF35A5YM69 484 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 FAM196BA6NMK8 535 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 RAD17O75943 681 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 CETN2P41208 172 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 GCNT3O95395 438 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 GPBP1Q86WP2 473 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 NAPGQ99747 312 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 COA1Q9GZY4 146 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 BCCIPQ9P287 314 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 RESP18Q5W5W9 173 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 MYCT1Q8N699 235 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 MRPL44Q9H9J2 332 aaKnown RBP14.61□□□□□ -0.07
HDAC7-201ENST00000080059 PPP2R2CQ9Y2T4 447 aa14.61□□□□□ -0.07
HDAC7-201ENST00000080059 EPB41P11171 864 aaKnown RBP14.6□□□□□ -0.07
HDAC7-201ENST00000080059 BAG6P46379 1132 aa14.6□□□□□ -0.07
HDAC7-201ENST00000080059 ERCC6LQ2NKX8 1250 aa14.6□□□□□ -0.07
HDAC7-201ENST00000080059 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-201ENST00000080059 NUP58Q9BVL2 599 aa14.6□□□□□ -0.07
HDAC7-201ENST00000080059 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
HDAC7-201ENST00000080059 BCS1LQ9Y276 419 aa14.6□□□□□ -0.07
HDAC7-201ENST00000080059 PCDHB13Q9Y5F0 798 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms