RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 PROCA1Q8NCQ7 364 aaPredicted RBP15.06■□□□□ 0
PHGDH-220ENST00000641570 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 SNX21Q969T3 373 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
PHGDH-220ENST00000641570 GPHNQ9NQX3 736 aaPredicted RBP15.06■□□□□ 0
PHGDH-220ENST00000641570 FRMPD2Q68DX3 1309 aaPredicted RBP15.06■□□□□ 0
PHGDH-220ENST00000641570 CCL15-CCL14A0A0B4J2E2 113 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 PDHBP11177 359 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 JAG1P78504 1218 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 GRM4Q14833 912 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 CCL15Q16663 113 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 FAM83BQ5T0W9 1011 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 SPRYD7Q5W111 196 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 RASAL3Q86YV0 1011 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 FAM184AQ8NB25 1140 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 RPAP3Q9H6T3 665 aaPredicted RBP15.05■□□□□ -0
PHGDH-220ENST00000641570 GPCPD1Q9NPB8 672 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
PHGDH-220ENST00000641570 FEM1BQ9UK73 627 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 TPCN1Q9ULQ1 816 aa15.05■□□□□ -0
PHGDH-220ENST00000641570 A0A0G2JLL6 359 aaPredicted RBP15.04■□□□□ -0
PHGDH-220ENST00000641570 A0A1W2PRG0 241 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L15C9J2P7 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 TMEM232C9JQI7 657 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L11C9JVI0 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L18D6R9N7 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L22D6RA61 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L19D6RCP7 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L20D6RJB6 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 PFKFB2O60825 505 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 FLOT1O75955 427 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 SLC10A3P09131 477 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 VCAM1P19320 739 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
PHGDH-220ENST00000641570 USP17L24Q0WX57 530 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 TRAF1Q13077 416 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 KCTD1Q719H9 257 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 PRRT2Q7Z6L0 340 aaPredicted RBP15.04■□□□□ -0
PHGDH-220ENST00000641570 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 WASF1Q92558 559 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 BRPF3Q9ULD4 1205 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 KCNH4Q9UQ05 1017 aa15.04■□□□□ -0
PHGDH-220ENST00000641570 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 KLRF2D3W0D1 207 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 GOLGA8HP0CJ92 632 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 XBP1P17861 261 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 NOVP48745 357 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 INHBEP58166 350 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SSRP1Q08945 709 aaKnown RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 ZNF543Q08ER8 600 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 NOGQ13253 232 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SH3D19Q5HYK7 790 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 NKX2-3Q8TAU0 364 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SMCR8Q8TEV9 937 aaPredicted RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 GTF3C6Q969F1 213 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 KIFC2Q96AC6 838 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 RRP36Q96EU6 259 aaKnown RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 TMX3Q96JJ7 454 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 C12orf42Q96LP6 360 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SENP2Q9HC62 589 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 AGTPBP1Q9UPW5 1226 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
PHGDH-220ENST00000641570 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
PHGDH-220ENST00000641570 ATAD5Q96QE3 1844 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 ZBED4O75132 1171 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 HMGN5P82970 282 aaKnown RBP15.02■□□□□ -0
PHGDH-220ENST00000641570 TROAPQ12815 778 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 TRIM29Q14134 588 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 ME3Q16798 604 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 SYDE2Q5VT97 1194 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 CCDC82Q8N4S0 544 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 NECAB1Q8N987 351 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
PHGDH-220ENST00000641570 CAPNS2Q96L46 248 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 PARK7Q99497 189 aaKnown RBP15.02■□□□□ -0
PHGDH-220ENST00000641570 NUP88Q99567 741 aaPredicted RBP15.02■□□□□ -0
PHGDH-220ENST00000641570 PNMA2Q9UL42 364 aa15.02■□□□□ -0
PHGDH-220ENST00000641570 FDX1P10109 184 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 EVCP57679 992 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 SCRN1Q12765 414 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 CYP4F22Q6NT55 531 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
PHGDH-220ENST00000641570 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
PHGDH-220ENST00000641570 SLC26A6Q9BXS9 759 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
PHGDH-220ENST00000641570 VAT1LQ9HCJ6 419 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 EMILIN3Q9NT22 766 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 HOXC10Q9NYD6 342 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
PHGDH-220ENST00000641570 RASSF10A6NK89 507 aa15□□□□□ -0.01
PHGDH-220ENST00000641570 SNHG28P0DPA3 235 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms