RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 IL17AQ16552 155 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 CAPZA3Q96KX2 299 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
SCARB2-221ENST00000640341 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 PRCPP42785 496 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
SCARB2-221ENST00000640341 RASGRP2Q7LDG7 609 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 HNRNPH2P55795 449 aaKnown RBP16.47■□□□□ 0.23
SCARB2-221ENST00000640341 TFAP4Q01664 338 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 PNKPQ96T60 521 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
SCARB2-221ENST00000640341 NPY5RQ15761 445 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 INF2Q27J81 1249 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 CDKAL1Q5VV42 579 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
SCARB2-221ENST00000640341 CCDC102AQ96A19 550 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-221ENST00000640341 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
SCARB2-221ENST00000640341 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 USP5P45974 858 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 ATP2C1P98194 919 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-221ENST00000640341 RSRC2Q7L4I2 434 aaKnown RBP16.46■□□□□ 0.23
SCARB2-221ENST00000640341 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
SCARB2-221ENST00000640341 VPS18Q9P253 973 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 CDC23Q9UJX2 597 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 UBA7P41226 1012 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
SCARB2-221ENST00000640341 FAM205AQ6ZU69 1335 aa16.46■□□□□ 0.22
SCARB2-221ENST00000640341 CALM1P0DP23 149 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 CALM2P0DP24 149 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 CALM3P0DP25 149 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
SCARB2-221ENST00000640341 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 SRGAP2O75044 1071 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 TCP11X2Q5H9J9 407 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-221ENST00000640341 FUT8Q9BYC5 575 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
SCARB2-221ENST00000640341 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
SCARB2-221ENST00000640341 BMP15O95972 392 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 CYP2C19P33261 490 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
SCARB2-221ENST00000640341 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 SLIT2O94813 1529 aa16.45■□□□□ 0.22
SCARB2-221ENST00000640341 CTAGE15A4D2H0 777 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 ZMYND10O75800 440 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 CTAGE8P0CG41 777 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 CTAGE6Q86UF2 777 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 CTAGE4Q8IX94 777 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 NAPGQ99747 312 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 H3BQF6 201 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 CCDC178Q5BJE1 867 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 BLIDQ8IZY5 108 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 NOA1Q8NC60 698 aaKnown RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 TTC26A0AVF1 554 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 CYP26C1Q6V0L0 522 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 AK7Q96M32 723 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 NAA15Q9BXJ9 866 aaKnown RBP16.44■□□□□ 0.22
SCARB2-221ENST00000640341 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 ANKZF1Q9H8Y5 726 aa16.44■□□□□ 0.22
SCARB2-221ENST00000640341 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 DIXDC1Q155Q3 683 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 TMTC1Q8IUR5 882 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 CEP112Q8N8E3 955 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 HPS3Q969F9 1004 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 B4DLN1 442 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 TNNT3P45378 269 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 VSNL1P62760 191 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms