RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GALNT17Q6IS24 598 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 CACTINQ8WUQ7 758 aaKnown RBP22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 CEP95Q96GE4 821 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 EPSTI1Q96J88 318 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 SPZ1Q9BXG8 430 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 PLIN4Q96Q06 1357 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 F8W031 263 aaPredicted RBP22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 M0R2N6 131 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 PRR29P0C7W0 189 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 BMP6P22004 513 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 GABPAQ06546 454 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 WWC2Q6AWC2 1192 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 TYW1BQ6NUM6 668 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 DAGLBQ8NCG7 672 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 CCDC148Q8NFR7 591 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 SYMPKQ92797 1274 aaKnown RBP22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 HSD3B7Q9H2F3 369 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 BARHL2Q9NY43 387 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 MAN1B1Q9UKM7 699 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 KLRF2D3W0D1 207 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 TRIML1Q8N9V2 468 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 SPATA20Q8TB22 786 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 SMARCE1Q969G3 411 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 CCDC34Q96HJ3 373 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 MTMR7Q9Y216 660 aa22.49■■□□□ 1.19
PCDHB11-202ENST00000624887 A0A087X0B3 334 aa22.48■■□□□ 1.19
PCDHB11-202ENST00000624887 NEMFO60524 1076 aa22.48■■□□□ 1.19
PCDHB11-202ENST00000624887 PARP1P09874 1014 aaKnown RBP22.48■■□□□ 1.19
PCDHB11-202ENST00000624887 PICALMQ13492 652 aa22.48■■□□□ 1.19
PCDHB11-202ENST00000624887 LRRC8AQ8IWT6 810 aa22.48■■□□□ 1.19
PCDHB11-202ENST00000624887 STXBP3O00186 592 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 TPM2P07951 284 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 SLFN14P0C7P3 912 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 SMARCA1P28370 1054 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 HHIPL2Q6UWX4 724 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 MXD3Q9BW11 206 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 XPO4Q9C0E2 1151 aaKnown RBP22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 DDX4Q9NQI0 724 aaKnown RBP22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 IFNKQ9P0W0 207 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 VWA3AA6NCI4 1184 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 G3V3G9 751 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 MYO1BO43795 1136 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 GOLGA8HP0CJ92 632 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 MORC3Q14149 939 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 DNTTIP2Q5QJE6 756 aaKnown RBP22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 DCAF8Q5TAQ9 597 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 HEATR3Q7Z4Q2 680 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 DHX58Q96C10 678 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 USP40Q9NVE5 1235 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 IMPACTQ9P2X3 320 aa22.47■■□□□ 1.19
PCDHB11-202ENST00000624887 SMC2O95347 1197 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 MCM7P33993 719 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 ARL6IP4Q66PJ3 421 aaKnown RBP22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 PODNQ7Z5L7 613 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 SH3RF1Q7Z6J0 888 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 GRAMD1CQ8IYS0 662 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 MLKLQ8NB16 471 aa22.46■■□□□ 1.19
PCDHB11-202ENST00000624887 C2CD5Q86YS7 1000 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 OSBPL5Q9H0X9 879 aaPredicted RBP22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 PCDHA6Q9UN73 950 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 PCDHA8Q9Y5H6 950 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 SCNN1DP51172 638 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 GSDMDP57764 484 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 FANCCQ00597 558 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 STYK1Q6J9G0 422 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 USP17L2Q6R6M4 530 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 RASGRP2Q7LDG7 609 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 FILIP1Q7Z7B0 1213 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 CCDC125Q86Z20 511 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 TEKT1Q969V4 418 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 MTMR4Q9NYA4 1195 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 DACH1Q9UI36 760 aa22.45■■□□□ 1.18
PCDHB11-202ENST00000624887 MYO3BQ8WXR4 1341 aa22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 MYH8P13535 1937 aa22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 CCDC194A0A1B0GVG4 234 aa22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 C4orf32Q8N8J7 132 aa22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 PDGFDQ9GZP0 370 aaPredicted RBP22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 SWAP70Q9UH65 585 aa22.44■■□□□ 1.18
PCDHB11-202ENST00000624887 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 IGKV6D-41A0A0C4DH26 115 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 ATP1A3P13637 1013 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 IL17AQ16552 155 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 APOBEC3HQ6NTF7 200 aaKnown RBP22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 CDC42EP5Q6NZY7 148 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 RASGRP4Q8TDF6 673 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 PAGE5Q96GU1 130 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 ZMYND12Q9H0C1 365 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 SERPINB13Q9UIV8 391 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 H0YIN7 160 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 HSP90AA2PQ14568 343 aaPredicted RBP22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 ARID5BQ14865 1188 aa22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 CCDC12Q8WUD4 166 aaPredicted RBP22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 RRP36Q96EU6 259 aaKnown RBP22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 PYM1Q9BRP8 204 aaKnown RBP22.43■■□□□ 1.18
PCDHB11-202ENST00000624887 AKR1B1P15121 316 aa22.42■■□□□ 1.18
PCDHB11-202ENST00000624887 CPVLQ9H3G5 476 aa22.42■■□□□ 1.18
PCDHB11-202ENST00000624887 DBNDD1Q9H9R9 158 aa22.42■■□□□ 1.18
PCDHB11-202ENST00000624887 USP17L5A8MUK1 530 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms