RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	TLR3	O15455	904 aa	Known RBP	6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	INHBB	P09529	407 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	GALK1	P51570	392 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	FBXL19	Q6PCT2	694 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	NLRX1	Q86UT6	975 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	DAGLB	Q8NCG7	672 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	IRF2BPL	Q9H1B7	796 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	COPRS	Q9NQ92	184 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	ROBO2	Q9HCK4	1378 aa		6.38	□□□□□ -1.39
LINC01515-217	ENST00000620859	GREM1	O60565	184 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	ATE1	O95260	518 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	PDE6B	P35913	854 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	RNF4	P78317	190 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	ARSH	Q5FYA8	562 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	PCDHB14	Q9Y5E9	798 aa		6.37	□□□□□ -1.39
LINC01515-217	ENST00000620859	TMEM82	A0PJX8	343 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	RPL10	P27635	214 aa	Known RBP	6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	MLEC	Q14165	292 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	CWF19L2	Q2TBE0	894 aa	Known RBP	6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	NBPF9	Q3BBW0	867 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	TMC3	Q7Z5M5	1100 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	TCTN2	Q96GX1	697 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	MAP6	Q96JE9	813 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	SGPP1	Q9BX95	441 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	KRTAP4-11	Q9BYQ6	195 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	FOXP3	Q9BZS1	431 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	BRMS1	Q9HCU9	246 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	GMIP	Q9P107	970 aa		6.36	□□□□□ -1.39
LINC01515-217	ENST00000620859	NCAN	O14594	1321 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	PRRG2	O14669	202 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	NRDC	O43847	1150 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	USP2	O75604	605 aa	Predicted RBP	6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	RAG1	P15918	1043 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	CHMP4BP1	P59074	171 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	SNW1	Q13573	536 aa	Known RBP	6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	CDCP2	Q5VXM1	449 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	WAPL	Q7Z5K2	1190 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	ZNF655	Q8N720	491 aa	Predicted RBP	6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	LINC00116	Q8NCU8	138 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	EHMT1	Q9H9B1	1298 aa		6.35	□□□□□ -1.39
LINC01515-217	ENST00000620859	POLR2B	P30876	1174 aa	Known RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	ITGAE	P38570	1179 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	EIF4A3	P38919	411 aa	Known RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	KIR2DL1	P43626	348 aa	Predicted RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	KIR2DL2	P43627	348 aa	Predicted RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	CRK	P46108	304 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	PCBP3	P57721	371 aa	Known RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	BBS9	Q3SYG4	887 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	OVOS1	Q6IE37	1185 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	TMEM132E	Q6IEE7	984 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	SIRT2	Q8IXJ6	389 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	HHIPL1	Q96JK4	782 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	CNNM2	Q9H8M5	875 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	CRTAC1	Q9NQ79	661 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	ZMYM5	Q9UJ78	669 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	TCFL5	Q9UL49	500 aa		6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.34	□□□□□ -1.39
LINC01515-217	ENST00000620859	OR14I1	A6ND48	311 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859		B8ZZF3	427 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	HRK	O00198	91 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	PDIA4	P13667	645 aa	Known RBP	6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	ERCC3	P19447	782 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	HOXA5	P20719	270 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	ADGRF1	Q5T601	910 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	ATG4C	Q96DT6	458 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	C20orf173	Q96LM9	149 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	CNOT6	Q9ULM6	557 aa	Known RBP	6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	KCTD3	Q9Y597	815 aa		6.33	□□□□□ -1.4
LINC01515-217	ENST00000620859	PRAMEF1	O95521	474 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	CTSW	P56202	376 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	RAD51AP2	Q09MP3	1159 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	SSPN	Q14714	243 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	SLC14A2	Q15849	920 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	ZPBP2	Q6X784	338 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	CEP128	Q6ZU80	1094 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	PRDM14	Q9GZV8	571 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	PARD6A	Q9NPB6	346 aa		6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	MBD1	Q9UIS9	605 aa	Predicted RBP	6.32	□□□□□ -1.4
LINC01515-217	ENST00000620859	SSU72P8	A0A1W2PR75	194 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	SIGLEC6	O43699	453 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	SYP	P08247	313 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	CCNF	P41002	786 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	SRSF3	P84103	164 aa	Known RBP	6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	ZNF385B	Q569K4	471 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	LCE5A	Q5TCM9	118 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	REXO1	Q8N1G1	1221 aa	Known RBP	6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	PLCD4	Q9BRC7	762 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	ADAMTS1	Q9UHI8	967 aa		6.31	□□□□□ -1.4
LINC01515-217	ENST00000620859	FKTN	O75072	461 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	CLEC3A	O75596	197 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	PNLIP	P16233	465 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	YBX1	P67809	324 aa	Known RBP	6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	CLC	Q05315	142 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	TCERG1L	Q5VWI1	586 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	NLRC3	Q7RTR2	1065 aa		6.3	□□□□□ -1.4
LINC01515-217	ENST00000620859	KCNC2	Q96PR1	638 aa		6.3	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms