RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CHGBP05060 677 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 HSPA1AP0DMV8 641 aaKnown RBP7.9□□□□□ -1.14
BRCC3-209ENST00000620502 HSPA1BP0DMV9 641 aaKnown RBP7.9□□□□□ -1.14
BRCC3-209ENST00000620502 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 PDE6AP16499 860 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 MAP2K1Q02750 393 aaPredicted RBP7.9□□□□□ -1.14
BRCC3-209ENST00000620502 MAP3K10Q02779 954 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 PICALMQ13492 652 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 NBPF20Q3BBV1 942 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 SLC9C2Q5TAH2 1124 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 TSHZ3Q63HK5 1081 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 TMED8Q6PL24 325 aaPredicted RBP7.9□□□□□ -1.14
BRCC3-209ENST00000620502 MIGA2Q7L4E1 593 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 ANKRD13AQ8IZ07 590 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 MIGA1Q8NAN2 632 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 PI4K2BQ8TCG2 481 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 POM121Q96HA1 1249 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 CSRNP1Q96S65 589 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 RIOK1Q9BRS2 568 aaKnown RBP7.9□□□□□ -1.14
BRCC3-209ENST00000620502 ZNF112Q9UJU3 913 aa7.9□□□□□ -1.14
BRCC3-209ENST00000620502 MYH7P12883 1935 aa7.9□□□□□ -1.15
BRCC3-209ENST00000620502 SIPA1L1O43166 1804 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 COL2A1P02458 1487 aaPredicted RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 MX1P20591 662 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 ADD2P35612 726 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 ABL2P42684 1182 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 NUCB1Q02818 461 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 VGLL4Q14135 290 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 INTS6LQ5JSJ4 861 aaKnown RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 DCAF15Q66K64 600 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 TEX11Q8IYF3 940 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 CCDC116Q8IYX3 515 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 TGFBRAP1Q8WUH2 860 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 ZKSCAN4Q969J2 545 aaPredicted RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 ITPKCQ96DU7 683 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 HOOK2Q96ED9 719 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 NOL10Q9BSC4 688 aaKnown RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 ZNF341Q9BYN7 854 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 OSBPL5Q9H0X9 879 aaPredicted RBP7.89□□□□□ -1.15
BRCC3-209ENST00000620502 STAP2Q9UGK3 403 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 PCDHB9Q9Y5E1 797 aa7.89□□□□□ -1.15
BRCC3-209ENST00000620502 FLT1P17948 1338 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 FOXN1O15353 648 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 ZIC2O95409 532 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-209ENST00000620502 ZBTB48P10074 688 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-209ENST00000620502 TM4SF4P48230 202 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-209ENST00000620502 UBE3CQ15386 1083 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 CHD1LQ86WJ1 897 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 MAPKAPK5Q8IW41 473 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 ZSCAN29Q8IWY8 852 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-209ENST00000620502 GPATCH3Q96I76 525 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 WNK4Q96J92 1243 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 ELP3Q9H9T3 547 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 SNCAIPQ9Y6H5 919 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 MYH1P12882 1939 aa7.88□□□□□ -1.15
BRCC3-209ENST00000620502 CEP350Q5VT06 3117 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 DDX60LQ5H9U9 1706 aaKnown RBP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 ERC2O15083 957 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 GLRX3O76003 335 aaKnown RBP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 INPP5BP32019 993 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 PDE1AP54750 535 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 METTL16Q86W50 562 aaKnown RBP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 CERS3Q8IU89 383 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 LCORLQ8N3X6 602 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 KBTBD3Q8NAB2 608 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 LNPKQ9C0E8 428 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 DHX36Q9H2U1 1008 aaKnown RBP7.87□□□□□ -1.15
BRCC3-209ENST00000620502 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 ATP13A2Q9NQ11 1180 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 RNF186Q9NXI6 227 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 PALD1Q9ULE6 856 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 CSADQ9Y600 493 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 PHIPQ8WWQ0 1821 aa7.87□□□□□ -1.15
BRCC3-209ENST00000620502 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 RNF113AO15541 343 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 PRKAB2O43741 272 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 HSPA8P11142 646 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 DHX9Q08211 1270 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 RRP1BQ14684 758 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 ZSCAN25Q6NSZ9 544 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 ERO1BQ86YB8 467 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 FOXP4Q8IVH2 680 aaPredicted RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 ZNF592Q92610 1267 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
BRCC3-209ENST00000620502 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
BRCC3-209ENST00000620502 DNAJC18Q9H819 358 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms