RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SAP30BPQ9UHR5 308 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 ARHGEF9O43307 516 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 STRNO43815 780 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 TMC4Q7Z404 712 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 C3orf20Q8ND61 904 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 IP6K1Q92551 441 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 PRM3Q9NNZ6 103 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 RASAL2Q9UJF2 1139 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 IBTKQ9P2D0 1353 aaPredicted RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 RASSF10A6NK89 507 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 H7C1D1 291 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 TNNI3KQ59H18 835 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 SCOCQ9UIL1 159 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 FPGT-TNNI3KV9GXZ4 949 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 ETF1P62495 437 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 ANKRD20A3Q5VUR7 823 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 TRMT1LQ7Z2T5 733 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 NUF2Q9BZD4 464 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 GFAPP14136 432 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 VWA3BQ502W6 1294 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 CROCCP3Q8IVE0 287 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 HAUS8Q9BT25 410 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 METTL22Q9BUU2 404 aaPredicted RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.86
NEB-220ENST00000618972 CALCAP01258 141 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 CCDC159P0C7I6 412 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 COPB2P35606 906 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 SSRP1Q08945 709 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 BICD1Q96G01 975 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 NPHP3-ACAD11A0A0J9YXS1 232 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 GUCY2CP25092 1073 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 CCDC80Q76M96 950 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 UTP6Q9NYH9 597 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 DIS3Q9Y2L1 958 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 NOL3O60936 208 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 PPFIA4O75335 1185 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 STXBP4Q6ZWJ1 553 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 ACTR5Q9H9F9 607 aaPredicted RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 GSTTP1A0A1W2PQM5 241 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 CLNS1AP54105 237 aaKnown RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 NUP88Q99567 741 aaPredicted RBP3.4□□□□□ -1.86
NEB-220ENST00000618972 SAR1BQ9Y6B6 198 aa3.4□□□□□ -1.86
NEB-220ENST00000618972 LSM1O15116 133 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 KDM1AO60341 852 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 RFX5P48382 616 aaPredicted RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 SNCBQ16143 134 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 PRAG1Q86YV5 1406 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 NUTM2AQ8IVF1 878 aaPredicted RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 LLPHQ9BRT6 129 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 PPP2R2CQ9Y2T4 447 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 TTC39AQ5SRH9 613 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 DNAJC10Q8IXB1 793 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 IFT122Q9HBG6 1241 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 TARSL2A2RTX5 802 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 GSTA2P09210 222 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 SYCP2LQ5T4T6 812 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 MMS22LQ6ZRQ5 1243 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 LINC00301Q8NCQ3 95 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 COG1Q8WTW3 980 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 A0A087X0B3 334 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 RCCD1A6NED2 376 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 XPO1O14980 1071 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 SFSWAPQ12872 951 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 SNIP1Q8TAD8 396 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 VTI1AQ96AJ9 217 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 DYNLL2Q96FJ2 89 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 HYOU1Q9Y4L1 999 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 GPATCH8Q9UKJ3 1502 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 PTF1AQ7RTS3 328 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 TRIM58Q8NG06 486 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 PPP1R14CQ8TAE6 165 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 MYSM1Q5VVJ2 828 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 FAM53CQ9NYF3 392 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 PHKA1P46020 1223 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 LIG3P49916 1009 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 ZFYVE27Q5T4F4 411 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 EPS15L1Q9UBC2 864 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 N4BP3O15049 544 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 BBOF1Q8ND07 529 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 MICAL1Q8TDZ2 1067 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 RPL13P26373 211 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 GCKP35557 465 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 CNOT10Q9H9A5 744 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 PIK3C2GO75747 1445 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 H7C0S8 307 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 DIAPH2O60879 1101 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 HOXC9P31274 260 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 CYP26C1Q6V0L0 522 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 KRT26Q7Z3Y9 468 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 MSANTD4Q8NCY6 345 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 FAM153BP0C7A2 387 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 GUCY2FP51841 1108 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 MTMR3Q13615 1198 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 FAM153CQ494X1 144 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 C1orf141Q5JVX7 400 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 FAM153AQ9UHL3 310 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 LMNB1P20700 586 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 CEP85LQ5SZL2 805 aa3.4□□□□□ -1.87
NEB-220ENST00000618972 CAPRIN2Q6IMN6 1127 aaKnown RBP3.4□□□□□ -1.87
NEB-220ENST00000618972 AFAP1L1Q8TED9 768 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 535 ms