RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 CACNB2Q08289 660 aaPredicted RBP29.99■■■□□ 2.39
VEGFA-228ENST00000617771 FAM83BQ5T0W9 1011 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 ANKLE1Q8NAG6 615 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 MROH8Q9H579 483 aa29.99■■■□□ 2.39
VEGFA-228ENST00000617771 MFSD14CQ5VZR4 134 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 CEP95Q96GE4 821 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 FBXO28Q9NVF7 368 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 PPP1R9AQ9ULJ8 1098 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 ADAMTS5Q9UNA0 930 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 PLIN4Q96Q06 1357 aa29.98■■■□□ 2.39
VEGFA-228ENST00000617771 F5H6K3 240 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 FOXP2O15409 715 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 TTLL1O95922 423 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 KLRC3Q07444 240 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 MCMDC2Q4G0Z9 681 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 DPP9Q86TI2 863 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 NCAPG2Q86XI2 1143 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 NEDD1Q8NHV4 660 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 RILPL2Q969X0 211 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 MTMR4Q9NYA4 1195 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 SYNPO2Q9UMS6 1093 aa29.97■■■□□ 2.39
VEGFA-228ENST00000617771 SLC25A27O95847 323 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 NDUFB10O96000 172 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 TMEM132BQ14DG7 1078 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 MKL1Q969V6 931 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 FAM227BQ96M60 508 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 OSBPL3Q9H4L5 887 aa29.96■■■□□ 2.39
VEGFA-228ENST00000617771 ADORA2AP29274 412 aa29.95■■■□□ 2.39
VEGFA-228ENST00000617771 TFAP4Q01664 338 aa29.95■■■□□ 2.39
VEGFA-228ENST00000617771 VPS53Q5VIR6 699 aa29.95■■■□□ 2.39
VEGFA-228ENST00000617771 PLEKHM2Q8IWE5 1019 aa29.95■■■□□ 2.39
VEGFA-228ENST00000617771 SLC5A4Q9NY91 659 aa29.95■■■□□ 2.39
VEGFA-228ENST00000617771 PARP14Q460N5 1801 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 A0A0D9SFI3 127 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 VWA5AO00534 786 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 ALX1Q15699 326 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 FAM47AQ5JRC9 791 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 PPP4R3BQ5MIZ7 849 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 NECAB2Q7Z6G3 386 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 ABRAQ8N0Z2 381 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 NPLOC4Q8TAT6 608 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 PAWRQ96IZ0 340 aaKnown RBP29.94■■■□□ 2.38
VEGFA-228ENST00000617771 NUP88Q99567 741 aaPredicted RBP29.94■■■□□ 2.38
VEGFA-228ENST00000617771 SLF1Q9BQI6 1058 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 FLRT1Q9NZU1 646 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 OGDHLQ9ULD0 1010 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 ZNF236Q9UL36 1845 aa29.94■■■□□ 2.38
VEGFA-228ENST00000617771 NMIQ13287 307 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-228ENST00000617771 ANAPC4Q9UJX5 808 aa29.93■■■□□ 2.38
VEGFA-228ENST00000617771 CCND3P30281 292 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-228ENST00000617771 COPB2P35606 906 aa29.92■■■□□ 2.38
VEGFA-228ENST00000617771 CTDSPL2Q05D32 466 aa29.92■■■□□ 2.38
VEGFA-228ENST00000617771 RIOX2Q8IUF8 465 aa29.92■■■□□ 2.38
VEGFA-228ENST00000617771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.92■■■□□ 2.382e-6■□□□□ 9
VEGFA-228ENST00000617771 TSPY2A6NKD2 308 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 H0YGN5 161 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 FCER1AP12319 257 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 STAT3P40763 770 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 LRRC47Q8N1G4 583 aaKnown RBP29.91■■■□□ 2.38
VEGFA-228ENST00000617771 GMCL1P1Q8NEA9 526 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 NR2E3Q9Y5X4 410 aa29.91■■■□□ 2.38
VEGFA-228ENST00000617771 OLFML2BQ68BL8 750 aa29.9■■■□□ 2.38
VEGFA-228ENST00000617771 PRPF38AQ8NAV1 312 aaKnown RBP29.9■■■□□ 2.38
VEGFA-228ENST00000617771 REPS2Q8NFH8 660 aa29.9■■■□□ 2.38
VEGFA-228ENST00000617771 DIS3LQ8TF46 1054 aaKnown RBP29.9■■■□□ 2.38
VEGFA-228ENST00000617771 NBPF3Q9H094 633 aa29.9■■■□□ 2.38
VEGFA-228ENST00000617771 MYH4Q9Y623 1939 aa29.89■■■□□ 2.38
VEGFA-228ENST00000617771 MFAP1P55081 439 aaKnown RBP29.89■■■□□ 2.38
VEGFA-228ENST00000617771 FEM1BQ9UK73 627 aa29.89■■■□□ 2.38
VEGFA-228ENST00000617771 ZNF214Q9UL59 606 aaPredicted RBP29.89■■■□□ 2.38
VEGFA-228ENST00000617771 CCDC171Q6TFL3 1326 aa29.89■■■□□ 2.38
VEGFA-228ENST00000617771 COBLO75128 1261 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 FGAP02671 866 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 HSPD1P10809 573 aaKnown RBP29.88■■■□□ 2.37
VEGFA-228ENST00000617771 SDSP20132 328 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 CYP2C19P33261 490 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 SLFN13Q68D06 897 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 ZNF589Q86UQ0 364 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-228ENST00000617771 MMP19Q99542 508 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 CTDP1Q9Y5B0 961 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-228ENST00000617771 ZMYM6O95789 1325 aa29.88■■■□□ 2.37
VEGFA-228ENST00000617771 LHX8Q68G74 356 aa29.87■■■□□ 2.37
VEGFA-228ENST00000617771 TEX13BQ9BXU2 312 aa29.87■■■□□ 2.37
VEGFA-228ENST00000617771 COL11A1P12107 1806 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-228ENST00000617771 ORC4O43929 436 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 EVI5O60447 810 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 RANBP6O60518 1105 aaKnown RBP29.86■■■□□ 2.37
VEGFA-228ENST00000617771 MSCO60682 206 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 ZBED4O75132 1171 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 IGHA2P01877 340 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 BMP3P12645 472 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 CNGA1P29973 690 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 KCTD2Q14681 263 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 KIFC2Q96AC6 838 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 C11orf49Q9H6J7 331 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 INCENPQ9NQS7 918 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 STX8Q9UNK0 236 aa29.86■■■□□ 2.37
VEGFA-228ENST00000617771 SLC34A2O95436 690 aa29.85■■■□□ 2.37
VEGFA-228ENST00000617771 MNX1P50219 401 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-228ENST00000617771 DDX20Q9UHI6 824 aaKnown RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms