RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 USH1GQ495M9 461 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 NUF2Q9BZD4 464 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 KIF21AQ7Z4S6 1674 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 ZNF790Q6PG37 636 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 MSANTD4Q8NCY6 345 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 TRPM2O94759 1503 aa10.28□□□□□ -0.76
SH3GLB1-205ENST00000616170 EFCAB13Q8IY85 973 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 TEX11Q8IYF3 940 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 TCP11Q8WWU5 503 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 PTPN22Q9Y2R2 807 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 LRRC43Q8N309 656 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.76
SH3GLB1-205ENST00000616170 B4DLN1 442 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 GMNNO75496 209 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 EHHADHQ08426 723 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 AP1ARQ63HQ0 302 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 EXOC3O60645 756 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 MRPL12P52815 198 aaKnown RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 NCBP1Q09161 790 aaKnown RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 SLC39A2Q9NP94 309 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 KDM5AP29375 1690 aaKnown RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 BTBD18B2RXH4 712 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 SMIM24O75264 130 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 CROCCP2Q86T23 111 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 PFDN4Q9NQP4 134 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 DENND2AQ9ULE3 1009 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 LARGE1O95461 756 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 MAN1A1P33908 653 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 MRPS25P82663 173 aaKnown RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 SLC7A5Q01650 507 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 CCDC84Q86UT8 332 aaPredicted RBP10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 TRIM4Q9C037 500 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 TFCP2L1Q9NZI6 479 aa10.27□□□□□ -0.77
SH3GLB1-205ENST00000616170 TTC36A6NLP5 189 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 RPN1P04843 607 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 TROVE2P10155 538 aaKnown RBP eCLIP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 RASSF2P50749 326 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ADCY7P51828 1080 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 COPB1P53618 953 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 GCKRQ14397 625 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 SH2D4BQ5SQS7 431 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 SPATA1Q5VX52 437 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ZMYM6O95789 1325 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ADCY8P40145 1251 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 CCDC89Q8N998 374 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 EAF2Q96CJ1 260 aaPredicted RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 USP44Q9H0E7 712 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 UHRF1BP1Q6BDS2 1440 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ARHGEF35A5YM69 484 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 A1BGP04217 495 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ATP5JP18859 108 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 PDIA3P30101 505 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 CYP2J2P51589 502 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 COG7P83436 770 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 NAA30Q147X3 362 aaPredicted RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 DCUN1D2Q6PH85 259 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 CCT6BQ92526 530 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 HAUS4Q9H6D7 363 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 EPB41L5Q9HCM4 733 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 DNM3Q9UQ16 869 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 NUP153P49790 1475 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 BSPRYQ5W0U4 402 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 CTAGE3PQ8IX95 158 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 SNX16P57768 344 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 ZYXQ15942 572 aaKnown RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 N4BP2L2Q92802 583 aaPredicted RBP10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 JRKLQ9Y4A0 524 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 PCDHA5Q9Y5H7 936 aa10.26□□□□□ -0.77
SH3GLB1-205ENST00000616170 THAP12O43422 761 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 BCRP11274 1271 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 DNM2P50570 870 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 GPKOWQ92917 476 aaPredicted RBP eCLIP10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 CA8P35219 290 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 TERF2Q15554 542 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 ZKSCAN8Q15776 578 aaPredicted RBP10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 KRT25Q7Z3Z0 450 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 DENND4BO75064 1496 aaPredicted RBP10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 KCNQ3O43525 872 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 IFNB1P01574 187 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 PLCG2P16885 1265 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 TRAF1Q13077 416 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 PALM2Q8IXS6 379 aa10.25□□□□□ -0.77
SH3GLB1-205ENST00000616170 DCAF5Q96JK2 942 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 257.1 ms