RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 BRMS1Q9HCU9 246 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 TMEM260Q9NX78 707 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PIM2Q9P1W9 311 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 KCNH3Q9ULD8 1083 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 SNED1Q8TER0 1413 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CCDC88AQ3V6T2 1871 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PALM3A6NDB9 673 aaPredicted RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 SMCO2A6NFE2 343 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 BECN2A8MW95 431 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 COBLO75128 1261 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 GH2P01242 217 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PDHBP11177 359 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 EEF2P13639 858 aaKnown RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 POLD1P28340 1107 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 RASSF7Q02833 373 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 GABPAQ06546 454 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 CXCL9Q07325 125 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 RRP1BQ14684 758 aaKnown RBP3.94□□□□□ -1.78
LIG4-205ENST00000614526 PPP2R5BQ15173 497 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 DLGAP5Q15398 846 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 NBPF9Q3BBW0 867 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 DPCR1Q3MIW9 517 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 TTC38Q5R3I4 469 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 PRAMEF18Q5VWM3 479 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 BLIDQ8IZY5 108 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 JMYQ8N9B5 988 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 TMEM39BQ9GZU3 492 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 SERTAD1Q9UHV2 236 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 FZD1Q9UP38 647 aa3.94□□□□□ -1.78
LIG4-205ENST00000614526 COL11A2P13942 1736 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 CCDC194A0A1B0GVG4 234 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 USP17L10C9JJH3 530 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TTLL1O95922 423 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 LETM2Q2VYF4 491 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 DALRD3Q5D0E6 543 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 NIM1KQ8IY84 436 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RTKN2Q8IZC4 609 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 AOPEPQ8N6M6 819 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 FAM200AQ8TCP9 573 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TRIM5Q9C035 493 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TTC12Q9H892 705 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 PI4KBQ9UBF8 816 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 SEC63Q9UGP8 760 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 FBXO2Q9UK22 296 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 SUGT1Q9Y2Z0 365 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ASTN2O75129 1339 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 A0A1W2PQ27 194 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 A0A1W2PQ64 194 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 A0A1W2PQD8 194 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 PP2D1A8MPX8 630 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ESPNB1AK53 854 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 GOLGA6L19H0YKK7 550 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 CUTAO60888 179 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 PRR29P0C7W0 189 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ECE1P42892 770 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RCAN1P53805 252 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 UBE2SQ16763 222 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RSBN1LQ6PCB5 846 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 SAMD7Q7Z3H4 446 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 CERS3Q8IU89 383 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 FOXP4Q8IVH2 680 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 C17orf53Q8N3J3 647 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 SUPT20HQ8NEM7 779 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 NLGN2Q8NFZ4 835 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RASSF8Q8NHQ8 419 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 JDP2Q8WYK2 163 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 GJA10Q969M2 543 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RRP36Q96EU6 259 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 PPP1R9BQ96SB3 815 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.93□□□□□ -1.78
LIG4-205ENST00000614526 KIAA1468Q9P260 1216 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 NOL7Q9UMY1 257 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 ADAMTSL1Q8N6G6 1762 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TIAM2Q8IVF5 1701 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 SCN9AQ15858 1988 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 A0A087X0B3 334 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 STXBP3O00186 592 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 PPP6R2O75170 966 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 PTPREP23469 700 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 SLC1A4P43007 532 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 GNAQP50148 359 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ICA1Q05084 483 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 DHX8Q14562 1220 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 USH1GQ495M9 461 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TBC1D10BQ4KMP7 808 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 SOGA3Q5TF21 947 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 RESP18Q5W5W9 173 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 CC2D2BQ6DHV5 1058 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ADGRF4Q8IZF3 695 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 SYMPKQ92797 1274 aaKnown RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 ZFP91Q96JP5 570 aaPredicted RBP3.93□□□□□ -1.78
LIG4-205ENST00000614526 BLZF1Q9H2G9 400 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TMEM60Q9H2L4 133 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TCP11L1Q9NUJ3 509 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 FAM13BQ9NYF5 915 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 TMOD2Q9NZR1 351 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 NRBP1Q9UHY1 535 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 SERPINA10Q9UK55 444 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 ZNRF3Q9ULT6 936 aa3.93□□□□□ -1.78
LIG4-205ENST00000614526 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms