RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PRPF4BQ13523 1007 aaKnown RBP7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 PPP2R5BQ15173 497 aa7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 NCAPH2Q6IBW4 605 aa7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 PNMA1Q8ND90 353 aa7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 GPCPD1Q9NPB8 672 aa7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 TBC1D7Q9P0N9 293 aa7.7□□□□□ -1.18
SYNPO2-206ENST00000610556 BICDL2A1A5D9 508 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CRKLP46109 303 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CASP7P55210 303 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 HNRNPH2P55795 449 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 MRPS25P82663 173 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 BRD3Q15059 726 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 C2CD5Q86YS7 1000 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 RRP36Q96EU6 259 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 SPAG5Q96R06 1193 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 NLRC4Q9NPP4 1024 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 SAR1BQ9Y6B6 198 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 B4DLN1 442 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TRAF5O00463 557 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TECP42680 631 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 RPS8P62241 208 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CYP27A1Q02318 531 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 KRT31Q15323 416 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 ZFYVE27Q5T4F4 411 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 RNF187Q5TA31 235 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 KRT79Q5XKE5 535 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CABP7Q86V35 215 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 EPB41L4AQ9HCS5 686 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 ZNF219Q9P2Y4 722 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 STRCQ7RTU9 1775 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 ZBTB22O15209 634 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TADA3O75528 432 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CYP2D6P10635 497 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 RFC4P35249 363 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CUL4BQ13620 913 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TRIM14Q14142 442 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 NCAPHQ15003 741 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 CPVLQ9H3G5 476 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TUBE1Q9UJT0 475 aa7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 FBXO2Q9UK22 296 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-206ENST00000610556 TRIM49BA6NDI0 452 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 GNPATO15228 680 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 IVLP07476 585 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 PARP1P09874 1014 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 GNA11P29992 359 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 CDR1P51861 262 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 PTPROQ16827 1216 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 CC2D1AQ6P1N0 951 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 BRINP3Q76B58 766 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SGMS1Q86VZ5 419 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 ENAHQ8N8S7 591 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SLC39A2Q9NP94 309 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 BIN2Q9UBW5 565 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 FAN1Q9Y2M0 1017 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 DLG5Q8TDM6 1919 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 ANKRD65E5RJM6 399 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 HSF2BPO75031 334 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 MFAP3LO75121 409 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 IL6STP40189 918 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SIK1P57059 783 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 MEX3CQ5U5Q3 659 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SMIM5Q71RC9 77 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 RRAGAQ7L523 313 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 TAX1BP1Q86VP1 789 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 FOXP4Q8IVH2 680 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 CCDC51Q96ER9 411 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 DYNLL2Q96FJ2 89 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 AGXT2Q9BYV1 514 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 MRPL44Q9H9J2 332 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 ABCB6Q9NP58 842 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 ANKRD26Q9UPS8 1709 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 USP17L8P0C7I0 530 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 MAGEA1P43355 309 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 PTPAQ15257 358 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 NELFCDQ8IXH7 590 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 SECISBP2LQ93073 1101 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 PRDM4Q9UKN5 801 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 ADGRG1Q9Y653 693 aa7.68□□□□□ -1.18
SYNPO2-206ENST00000610556 CPDO75976 1380 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 KDM6AO15550 1401 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 CCDC151A5D8V7 595 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 PP2D1A8MPX8 630 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 H7C1D1 291 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 RIMBP2O15034 1052 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 SRGAP2O75044 1071 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 TRIM28Q13263 835 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 RAPGEF1Q13905 1077 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 NONOQ15233 471 aaKnown RBP eCLIP7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 MICALL1Q8N3F8 863 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 TC2NQ8N9U0 490 aa7.67□□□□□ -1.18
SYNPO2-206ENST00000610556 AFAP1L1Q8TED9 768 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms