RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 ANKRD23Q86SG2 305 aa25.28■■□□□ 1.64
NECAB3-221ENST00000607055 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
NECAB3-221ENST00000607055 TANGO6Q9C0B7 1094 aa25.28■■□□□ 1.64
NECAB3-221ENST00000607055 ALDH8A1Q9H2A2 487 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-221ENST00000607055 FRMPD2Q68DX3 1309 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-221ENST00000607055 IGF2BP3O00425 579 aaKnown RBP eCLIP25.27■■□□□ 1.64
NECAB3-221ENST00000607055 SNHG28P0DPA3 235 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 RXRAP19793 462 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 TM4SF4P48230 202 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 TROAPQ12815 778 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 ANKRD1Q15327 319 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 APOA5Q6Q788 366 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 KCTD1Q719H9 257 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 NOL8Q76FK4 1167 aaKnown RBP25.27■■□□□ 1.64
NECAB3-221ENST00000607055 IFNL1Q8IU54 200 aa25.27■■□□□ 1.64
NECAB3-221ENST00000607055 USP17L15C9J2P7 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L13C9JLJ4 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L11C9JVI0 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L18D6R9N7 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L22D6RA61 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L17D6RBQ6 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L19D6RCP7 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L20D6RJB6 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 PDHXO00330 501 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 USP17L24Q0WX57 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 PABPC4Q13310 644 aaKnown RBP eCLIP25.26■■□□□ 1.63
NECAB3-221ENST00000607055 MICU3Q86XE3 530 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 REM2Q8IYK8 340 aaPredicted RBP25.26■■□□□ 1.63
NECAB3-221ENST00000607055 GPCPD1Q9NPB8 672 aa25.26■■□□□ 1.63
NECAB3-221ENST00000607055 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 ZBTB43O43298 467 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 PARP1P09874 1014 aaKnown RBP25.25■■□□□ 1.63
NECAB3-221ENST00000607055 GOLGA8HP0CJ92 632 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 ZNF543Q08ER8 600 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 GRM4Q14833 912 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 CATSPERGQ6ZRH7 1159 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 CCDC144CPQ8IYA2 1237 aa25.25■■□□□ 1.63
NECAB3-221ENST00000607055 THSD7BQ9C0I4 1608 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 TMEM232C9JQI7 657 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 ST18O60284 1047 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 CALM1P0DP23 149 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 CALM2P0DP24 149 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 CALM3P0DP25 149 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 OSBPP22059 807 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 HOXA7P31268 230 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-221ENST00000607055 IRX3P78415 501 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-221ENST00000607055 IKQ13123 557 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-221ENST00000607055 OTUD7BQ6GQQ9 843 aa25.24■■□□□ 1.63
NECAB3-221ENST00000607055 SAMD1Q6SPF0 538 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-221ENST00000607055 FLOT1O75955 427 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 ASPRV1Q53RT3 343 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 TTBK2Q6IQ55 1244 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 DNAJC5GQ8N7S2 189 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 CTCFLQ8NI51 663 aaPredicted RBP25.23■■□□□ 1.63
NECAB3-221ENST00000607055 ASCC2Q9H1I8 757 aaPredicted RBP25.23■■□□□ 1.63
NECAB3-221ENST00000607055 FBXO28Q9NVF7 368 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 SLC45A1Q9Y2W3 748 aa25.23■■□□□ 1.63
NECAB3-221ENST00000607055 GOLGA8AA7E2F4 631 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 EVCP57679 992 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 GPATCH4Q5T3I0 446 aaKnown RBP25.22■■□□□ 1.63
NECAB3-221ENST00000607055 STAG2Q8N3U4 1231 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 MAP3K14Q99558 947 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 MAD2L2Q9UI95 211 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 FEM1BQ9UK73 627 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 PNMA3Q9UL41 463 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 TPCN1Q9ULQ1 816 aa25.22■■□□□ 1.63
NECAB3-221ENST00000607055 CYP2C8P10632 490 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 PDIA3P30101 505 aaKnown RBP25.21■■□□□ 1.63
NECAB3-221ENST00000607055 KIF5BP33176 963 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 SLC16A2P36021 539 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 METAP2P50579 478 aaKnown RBP eCLIP25.21■■□□□ 1.63
NECAB3-221ENST00000607055 STAT2P52630 851 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 FANCBQ8NB91 859 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 ZCCHC17Q9NP64 241 aaKnown RBP25.21■■□□□ 1.63
NECAB3-221ENST00000607055 HPS5Q9UPZ3 1129 aa25.21■■□□□ 1.63
NECAB3-221ENST00000607055 PALM3A6NDB9 673 aaPredicted RBP25.2■■□□□ 1.62
NECAB3-221ENST00000607055 RCAN1P53805 252 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 STK3Q13188 491 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 COG2Q14746 738 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 TAF1CQ15572 869 aaPredicted RBP25.2■■□□□ 1.62
NECAB3-221ENST00000607055 RTN1Q16799 776 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 FAM160B2Q86V87 743 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 IL27Q8NEV9 243 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 CHURC1Q8WUH1 139 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 KIFC2Q96AC6 838 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 ZNF274Q96GC6 653 aaPredicted RBP25.2■■□□□ 1.62
NECAB3-221ENST00000607055 PARK7Q99497 189 aaKnown RBP25.2■■□□□ 1.62
NECAB3-221ENST00000607055 P2RX7Q99572 595 aaKnown RBP25.2■■□□□ 1.62
NECAB3-221ENST00000607055 SLF1Q9BQI6 1058 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 UBA5Q9GZZ9 404 aa25.2■■□□□ 1.62
NECAB3-221ENST00000607055 KLRF2D3W0D1 207 aa25.19■■□□□ 1.62
NECAB3-221ENST00000607055 ALDH1A1P00352 501 aa25.19■■□□□ 1.62
NECAB3-221ENST00000607055 CCT2P78371 535 aaKnown RBP25.19■■□□□ 1.62
NECAB3-221ENST00000607055 CPVLQ9H3G5 476 aa25.19■■□□□ 1.62
NECAB3-221ENST00000607055 PPP1R9AQ9ULJ8 1098 aa25.19■■□□□ 1.62
NECAB3-221ENST00000607055 CD2BP2O95400 341 aaKnown RBP25.18■■□□□ 1.62
NECAB3-221ENST00000607055 DSG3P32926 999 aa25.18■■□□□ 1.62
NECAB3-221ENST00000607055 SMCR8Q8TEV9 937 aaPredicted RBP25.18■■□□□ 1.62
NECAB3-221ENST00000607055 ATG4CQ96DT6 458 aa25.18■■□□□ 1.62
NECAB3-221ENST00000607055 HOXC10Q9NYD6 342 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms