RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 RBBP6Q7Z6E9 1792 aaKnown RBP17.07■□□□□ 0.32
TUBE1-208ENST00000604743 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 ZNF213O14771 459 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 ORC4O43929 436 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 NEFLP07196 543 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 MKL1Q969V6 931 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 MTMR7Q9Y216 660 aa17.06■□□□□ 0.32
TUBE1-208ENST00000604743 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 INHAP05111 366 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
TUBE1-208ENST00000604743 CHMLP26374 656 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 AKNAD1Q5T1N1 836 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 SLFN13Q68D06 897 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 PXYLP1Q8TE99 480 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 MOV10L1Q9BXT6 1211 aaKnown RBP17.05■□□□□ 0.32
TUBE1-208ENST00000604743 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 IL17RBQ9NRM6 502 aa17.05■□□□□ 0.32
TUBE1-208ENST00000604743 ZNFX1Q9P2E3 1918 aaKnown RBP17.05■□□□□ 0.32
TUBE1-208ENST00000604743 FGRP09769 529 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 CCL5P13501 91 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 SOCS4Q8WXH5 440 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 UNC93B1Q9H1C4 597 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 IVNS1ABPQ9Y6Y0 642 aa17.04■□□□□ 0.32
TUBE1-208ENST00000604743 ERCC3P19447 782 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 RGS2P41220 211 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 IMMTQ16891 758 aaKnown RBP17.03■□□□□ 0.32
TUBE1-208ENST00000604743 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 MORN1Q5T089 497 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 NCAPG2Q86XI2 1143 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
TUBE1-208ENST00000604743 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-208ENST00000604743 NEDD4P46934 1319 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 RAD50Q92878 1312 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 VWA5AO00534 786 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 BMP3P12645 472 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 PTPREP23469 700 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 MCCP23508 829 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 SLC4A3P48751 1232 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 TRIM32Q13049 653 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 TMEM132BQ14DG7 1078 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 NKX2-3Q8TAU0 364 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 TRIB2Q92519 343 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 KIFC2Q96AC6 838 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 CTNNA3Q9UI47 895 aa17.02■□□□□ 0.32
TUBE1-208ENST00000604743 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.32
TUBE1-208ENST00000604743 SLC15A5A6NIM6 579 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 TNRC18O15417 2968 aaPredicted RBP17.01■□□□□ 0.31
TUBE1-208ENST00000604743 HMGCRP04035 888 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 SLC1A4P43007 532 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
TUBE1-208ENST00000604743 MAP2K5Q13163 448 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 CCL14Q16627 93 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 ESR2Q92731 530 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 USP6NLQ92738 828 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 SYNPO2Q9UMS6 1093 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
TUBE1-208ENST00000604743 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
TUBE1-208ENST00000604743 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
TUBE1-208ENST00000604743 STAT3P40763 770 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 PTH1RQ03431 593 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 RASGRP2Q7LDG7 609 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 CPXCR1Q8N123 301 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
TUBE1-208ENST00000604743 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 FEM1BQ9UK73 627 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 BRCA2P51587 3418 aa17■□□□□ 0.31
TUBE1-208ENST00000604743 B4E1Z4 1266 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 SGSM2O43147 1006 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 ZBED4O75132 1171 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 KDM4AO75164 1064 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 GRB14Q14449 540 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 CCDC96Q2M329 555 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 KCTD1Q719H9 257 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 DPP9Q86TI2 863 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 APBA2Q99767 749 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 MROH8Q9H579 483 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
TUBE1-208ENST00000604743 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 SLC25A27O95847 323 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 GJB1P08034 283 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 ADORA2AP29274 412 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 STAT2P52630 851 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms