RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 RNF41Q9H4P4 317 aaPredicted RBP28.65■■■□□ 2.18
UBE2E3-213ENST00000602959 ADAMTS5Q9UNA0 930 aa28.65■■■□□ 2.18
UBE2E3-213ENST00000602959 ZNF213O14771 459 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 NOVP48745 357 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 MFSD6Q6ZSS7 791 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 SOCS4Q8WXH5 440 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 CCDC136Q96JN2 1154 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 NUP88Q99567 741 aaPredicted RBP28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 TOMM22Q9NS69 142 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 FBXO28Q9NVF7 368 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 PPP1R9AQ9ULJ8 1098 aa28.64■■■□□ 2.18
UBE2E3-213ENST00000602959 NMT2O60551 498 aa28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 RRP12Q5JTH9 1297 aaKnown RBP28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 PLEKHH3Q7Z736 793 aa28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 SPATC1LQ9H0A9 340 aa28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 CTNNA3Q9UI47 895 aa28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 STX8Q9UNK0 236 aa28.63■■■□□ 2.17
UBE2E3-213ENST00000602959 NT5C2P49902 561 aa28.62■■■□□ 2.17
UBE2E3-213ENST00000602959 NUDT12Q9BQG2 462 aa28.62■■■□□ 2.17
UBE2E3-213ENST00000602959 TCP11L1Q9NUJ3 509 aa28.62■■■□□ 2.17
UBE2E3-213ENST00000602959 ZNF236Q9UL36 1845 aa28.62■■■□□ 2.17
UBE2E3-213ENST00000602959 SGSM2O43147 1006 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 ELNP15502 786 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 IMMTQ16891 758 aaKnown RBP28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 MORN1Q5T089 497 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 SHCBP1Q8NEM2 672 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 USP6NLQ92738 828 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 SLF1Q9BQI6 1058 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 TMEM106CQ9BVX2 250 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 MOV10L1Q9BXT6 1211 aaKnown RBP28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 NEDD4P46934 1319 aa28.61■■■□□ 2.17
UBE2E3-213ENST00000602959 POTEFA5A3E0 1075 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 VWA5AO00534 786 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 UBXN2AP68543 259 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 BMP2KLQ5H9B9 411 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 SLFN13Q68D06 897 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 SKAP1Q86WV1 359 aa28.6■■■□□ 2.17
UBE2E3-213ENST00000602959 XRCC5P13010 732 aaKnown RBP28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 MTFR1Q15390 333 aa28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 SAMD1Q6SPF0 538 aaPredicted RBP28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 GMCL1Q96IK5 515 aa28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 CWC22Q9HCG8 908 aaKnown RBP28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 BIN2Q9UBW5 565 aaPredicted RBP28.59■■■□□ 2.17
UBE2E3-213ENST00000602959 CENPBP07199 599 aaPredicted RBP28.58■■■□□ 2.17
UBE2E3-213ENST00000602959 TMEM132BQ14DG7 1078 aa28.58■■■□□ 2.17
UBE2E3-213ENST00000602959 REPS2Q8NFH8 660 aa28.58■■■□□ 2.17
UBE2E3-213ENST00000602959 ESR2Q92731 530 aa28.58■■■□□ 2.17
UBE2E3-213ENST00000602959 SLC15A5A6NIM6 579 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 MYCP01106 439 aaPredicted RBP28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 INHAP05111 366 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 BMP3P12645 472 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 PTPREP23469 700 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 RGS2P41220 211 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 MLLT1Q03111 559 aaPredicted RBP28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 GRB14Q14449 540 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 WDR78Q5VTH9 848 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 PRPF38AQ8NAV1 312 aaKnown RBP28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 NKX2-3Q8TAU0 364 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 FEM1BQ9UK73 627 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 IVNS1ABPQ9Y6Y0 642 aa28.57■■■□□ 2.16
UBE2E3-213ENST00000602959 HMGCRP04035 888 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 ERCC3P19447 782 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 CYP2B6P20813 491 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 PLS1Q14651 629 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 APBA2Q99767 749 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 MROH8Q9H579 483 aa28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 ZNF214Q9UL59 606 aaPredicted RBP28.56■■■□□ 2.16
UBE2E3-213ENST00000602959 CCL5P13501 91 aa28.55■■■□□ 2.16
UBE2E3-213ENST00000602959 SLC1A4P43007 532 aa28.55■■■□□ 2.16
UBE2E3-213ENST00000602959 PTH1RQ03431 593 aa28.55■■■□□ 2.16
UBE2E3-213ENST00000602959 MAP2K5Q13163 448 aa28.55■■■□□ 2.16
UBE2E3-213ENST00000602959 TRIB2Q92519 343 aa28.55■■■□□ 2.16
UBE2E3-213ENST00000602959 TNRC18O15417 2968 aaPredicted RBP28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 SLC25A27O95847 323 aa28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 TOP1P11387 765 aaKnown RBP28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 RCSD1Q6JBY9 416 aa28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 RIOX2Q8IUF8 465 aa28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 TRMT44Q8IYL2 757 aaKnown RBP28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 TTC14Q96N46 770 aa28.54■■■□□ 2.16
UBE2E3-213ENST00000602959 STRNO43815 780 aa28.53■■■□□ 2.16
UBE2E3-213ENST00000602959 KDM4AO75164 1064 aa28.53■■■□□ 2.16
UBE2E3-213ENST00000602959 TMEM47Q9BQJ4 181 aa28.53■■■□□ 2.16
UBE2E3-213ENST00000602959 CNNM2Q9H8M5 875 aa28.53■■■□□ 2.16
UBE2E3-213ENST00000602959 U3KPZ7 1027 aaPredicted RBP28.53■■■□□ 2.16
UBE2E3-213ENST00000602959 TMEM232C9JQI7 657 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 ATP2A1O14983 1001 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 PLA2G6O60733 806 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 HOXC6P09630 235 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 MCCP23508 829 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 COPB2P35606 906 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 STAT3P40763 770 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 STAT2P52630 851 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 NCAPG2Q86XI2 1143 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 KIFC2Q96AC6 838 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 KRT23Q9C075 422 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 RNF208Q9H0X6 261 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 UNC93B1Q9H1C4 597 aa28.52■■■□□ 2.16
UBE2E3-213ENST00000602959 ZNFX1Q9P2E3 1918 aaKnown RBP28.51■■■□□ 2.16
UBE2E3-213ENST00000602959 PDE4DIPQ5VU43 2346 aa28.51■■■□□ 2.15
UBE2E3-213ENST00000602959 B4E1Z4 1266 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms