RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 BTBD18B2RXH4 712 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 CAP2P40123 477 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 TRPM4Q8TD43 1214 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 PIBF1Q8WXW3 757 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 RRP36Q96EU6 259 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 BRMS1Q9HCU9 246 aa20.35■□□□□ 0.85
SHKBP1-224ENST00000600718 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 GMCL1P1Q8NEA9 526 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 ZBTB21Q9ULJ3 1066 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 FRMPD2Q68DX3 1309 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 MYH6P13533 1939 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 KRT2P35908 639 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 GPR162Q16538 588 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 HOOK2Q96ED9 719 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 SCAF8Q9UPN6 1271 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-224ENST00000600718 CALML3P27482 149 aa20.33■□□□□ 0.84
SHKBP1-224ENST00000600718 NLRP5P59047 1200 aa20.33■□□□□ 0.84
SHKBP1-224ENST00000600718 CEBPZQ03701 1054 aaKnown RBP20.33■□□□□ 0.84
SHKBP1-224ENST00000600718 UBA5Q9GZZ9 404 aa20.33■□□□□ 0.84
SHKBP1-224ENST00000600718 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.84
SHKBP1-224ENST00000600718 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 CCDC96Q2M329 555 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 GZF1Q9H116 711 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 GINM1Q9NU53 330 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 SEC63Q9UGP8 760 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 PHF20L1A8MW92 1017 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 F5H6K3 240 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 YEATS4O95619 227 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 KLRC3Q07444 240 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 CPVLQ9H3G5 476 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 BARHL2Q9NY43 387 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 PPP2R3BQ9Y5P8 575 aa20.32■□□□□ 0.84
SHKBP1-224ENST00000600718 MYH15Q9Y2K3 1946 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 GOLGA6L4A6NEF3 574 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 ASNSP08243 561 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 SLC1A4P43007 532 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 ANO1Q5XXA6 986 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 DCAF15Q66K64 600 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 GALNT17Q6IS24 598 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 CCDC148Q8NFR7 591 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 OXER1Q8TDS5 423 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 FTOQ9C0B1 505 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 CLIC4Q9Y696 253 aa20.31■□□□□ 0.84
SHKBP1-224ENST00000600718 NR5A1Q13285 461 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 CAVIN1Q6NZI2 390 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 A0A1W2PRG0 241 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 NPY5RQ15761 445 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 RILPL1Q5EBL4 403 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 TTBK2Q6IQ55 1244 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 KCTD1Q719H9 257 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 CCDC12Q8WUD4 166 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 GPKOWQ92917 476 aaPredicted RBP eCLIP20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 PIGSQ96S52 555 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 GGA3Q9NZ52 723 aa20.3■□□□□ 0.84
SHKBP1-224ENST00000600718 PITPNM2Q9BZ72 1349 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 STXBP3O00186 592 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 RAD21O60216 631 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 NDUFB10O96000 172 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 STK38Q15208 465 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 SH2D4AQ9H788 454 aa20.29■□□□□ 0.84
SHKBP1-224ENST00000600718 CTNND1O60716 968 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 HOMER1Q86YM7 354 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 PGBD1Q96JS3 809 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 JMJD4Q9H9V9 463 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 BLIDQ8IZY5 108 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 DAGLBQ8NCG7 672 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 TNFRSF25Q93038 417 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 ZNF341Q9BYN7 854 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 GOPCQ9HD26 462 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 PCDHA4Q9UN74 947 aa20.28■□□□□ 0.84
SHKBP1-224ENST00000600718 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 SPTLC2O15270 562 aa20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 SLC39A14Q15043 492 aa20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms