RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CCDC178Q5BJE1 867 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 PPP4R3BQ5MIZ7 849 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 DGKHQ86XP1 1220 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 ENAHQ8N8S7 591 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-205ENST00000600117 TTC14Q96N46 770 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 C22orf23Q9BZE7 217 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 TM6SF1Q9BZW5 370 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 STX8Q9UNK0 236 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 NR2E3Q9Y5X4 410 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 WDR19Q8NEZ3 1342 aa22.14■■□□□ 1.14
CCDC9-205ENST00000600117 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 CPA1P15085 419 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 HOXD10P28358 340 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 GRK4P32298 578 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 PSMC4P43686 418 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.13
CCDC9-205ENST00000600117 HMGCS2P54868 508 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 DHX32Q7L7V1 743 aaKnown RBP22.14■■□□□ 1.13
CCDC9-205ENST00000600117 IGDCC4Q8TDY8 1250 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 TRIM47Q96LD4 638 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 C12orf42Q96LP6 360 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 FEZ1Q99689 392 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 UBAC1Q9BSL1 405 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 MTA3Q9BTC8 594 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 ZSWIM6Q9HCJ5 1215 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 EMILIN3Q9NT22 766 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 SYNPO2Q9UMS6 1093 aa22.14■■□□□ 1.13
CCDC9-205ENST00000600117 IFIT3O14879 490 aaKnown RBP22.13■■□□□ 1.13
CCDC9-205ENST00000600117 HMGB1P09429 215 aaKnown RBP22.13■■□□□ 1.13
CCDC9-205ENST00000600117 PSMA5P28066 241 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 CTGFP29279 349 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 ZYXQ15942 572 aaKnown RBP22.13■■□□□ 1.13
CCDC9-205ENST00000600117 KIAA1755Q5JYT7 1200 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 BLOC1S2Q6QNY1 142 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 USP17L2Q6R6M4 530 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 LRRC47Q8N1G4 583 aaKnown RBP22.13■■□□□ 1.13
CCDC9-205ENST00000600117 RAET1EQ8TD07 263 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 TMEM47Q9BQJ4 181 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 SH2D4AQ9H788 454 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 VCPKMTQ9H867 229 aa22.13■■□□□ 1.13
CCDC9-205ENST00000600117 GPHNQ9NQX3 736 aaPredicted RBP22.13■■□□□ 1.13
CCDC9-205ENST00000600117 A0A1W2PPC1 479 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 TOP1P11387 765 aaKnown RBP22.12■■□□□ 1.13
CCDC9-205ENST00000600117 CCL5P13501 91 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 CASTP20810 708 aaKnown RBP22.12■■□□□ 1.13
CCDC9-205ENST00000600117 OSBPP22059 807 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 RPS6KB1P23443 525 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 USP14P54578 494 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 TMEM87BQ96K49 555 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 KIF2CQ99661 725 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 UPF2Q9HAU5 1272 aaKnown RBP22.12■■□□□ 1.13
CCDC9-205ENST00000600117 SENP2Q9HC62 589 aa22.12■■□□□ 1.13
CCDC9-205ENST00000600117 SH2B2O14492 632 aaPredicted RBP22.11■■□□□ 1.13
CCDC9-205ENST00000600117 TMEM67Q5HYA8 995 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 GPAT2Q6NUI2 795 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 PROCA1Q8NCQ7 364 aaPredicted RBP22.11■■□□□ 1.13
CCDC9-205ENST00000600117 TBC1D32Q96NH3 1257 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 LRRC2Q9BYS8 371 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 LY9Q9HBG7 655 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 CPA4Q9UI42 421 aa22.11■■□□□ 1.13
CCDC9-205ENST00000600117 F5H6K3 240 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 ECM2O94769 699 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-205ENST00000600117 FMNL1O95466 1100 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-205ENST00000600117 KLRC3Q07444 240 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 SART3Q15020 963 aaKnown RBP22.1■■□□□ 1.13
CCDC9-205ENST00000600117 GADL1Q6ZQY3 521 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 RUFY3Q7L099 469 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 FASTKD5Q7L8L6 764 aaKnown RBP22.1■■□□□ 1.13
CCDC9-205ENST00000600117 ANKRD23Q86SG2 305 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 GMCL1P1Q8NEA9 526 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 UPF3BQ9BZI7 483 aaKnown RBP22.1■■□□□ 1.13
CCDC9-205ENST00000600117 RNF208Q9H0X6 261 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 TMOD4Q9NZQ9 345 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 UNC80Q8N2C7 3258 aa22.1■■□□□ 1.13
CCDC9-205ENST00000600117 MYPNQ86TC9 1320 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 ADGRA2Q96PE1 1338 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 NDUFB10O96000 172 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 VCAM1P19320 739 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 UBXN2AP68543 259 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 WTAPQ15007 396 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 TREML2Q5T2D2 321 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
CCDC9-205ENST00000600117 GOPCQ9HD26 462 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 AGTPBP1Q9UPW5 1226 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 MGAMO43451 1857 aa22.09■■□□□ 1.13
CCDC9-205ENST00000600117 ERICH2A1L162 156 aa22.08■■□□□ 1.13
CCDC9-205ENST00000600117 SPICE1Q8N0Z3 855 aa22.08■■□□□ 1.13
CCDC9-205ENST00000600117 LPAR1Q92633 364 aa22.08■■□□□ 1.13
CCDC9-205ENST00000600117 BIN2Q9UBW5 565 aaPredicted RBP22.08■■□□□ 1.13
CCDC9-205ENST00000600117 CYP46A1Q9Y6A2 500 aa22.08■■□□□ 1.13
CCDC9-205ENST00000600117 PDHXO00330 501 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 FARP2O94887 1054 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-205ENST00000600117 LIFRP42702 1097 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 SLFN13Q68D06 897 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 RASGRP2Q7LDG7 609 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 PNMA1Q8ND90 353 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 AGXT2Q9BYV1 514 aa22.07■■□□□ 1.12
CCDC9-205ENST00000600117 KAT14Q9H8E8 782 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms