RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
ZNF544-213ENST00000599227 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 HPS3Q969F9 1004 aa12.66□□□□□ -0.38
ZNF544-213ENST00000599227 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
ZNF544-213ENST00000599227 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
ZNF544-213ENST00000599227 MECOMQ03112 1051 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 CUL4BQ13620 913 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
ZNF544-213ENST00000599227 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 PAGE5Q96GU1 130 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 LIFRP42702 1097 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
ZNF544-213ENST00000599227 EFCAB8A8MWE9 144 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 TXLNAP40222 546 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 STAT6P42226 847 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 PLCD1P51178 756 aa12.65□□□□□ -0.38
ZNF544-213ENST00000599227 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 STX10O60499 249 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 SF3A3Q12874 501 aaKnown RBP eCLIP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 MFSD14BQ5SR56 506 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 PHLPP2Q6ZVD8 1323 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 SP4Q02446 784 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 USH1GQ495M9 461 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 ENOX1Q8TC92 643 aaKnown RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 DBNDD1Q9H9R9 158 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 MYO1BO43795 1136 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 UBXN2AP68543 259 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 DPYDQ12882 1025 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 MORC3Q14149 939 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
ZNF544-213ENST00000599227 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
ZNF544-213ENST00000599227 ASIC1P78348 528 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 LONRF2Q1L5Z9 754 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 ANKRD13CQ8N6S4 541 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 VGLL2Q8N8G2 317 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 CHP1Q99653 195 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 N4BP1O75113 896 aaKnown RBP12.63□□□□□ -0.39
ZNF544-213ENST00000599227 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 COA7Q96BR5 231 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
ZNF544-213ENST00000599227 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
ZNF544-213ENST00000599227 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 CTAGE9A4FU28 777 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
ZNF544-213ENST00000599227 PRKG1Q13976 671 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 SPATA1Q5VX52 437 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
ZNF544-213ENST00000599227 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
ZNF544-213ENST00000599227 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 IPO7O95373 1038 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 GPS2Q13227 327 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 DEF6Q9H4E7 631 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 TOM1O60784 492 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 KRT31Q15323 416 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 TCERG1LQ5VWI1 586 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 GSPT2Q8IYD1 628 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 LINC00116Q8NCU8 138 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
ZNF544-213ENST00000599227 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
ZNF544-213ENST00000599227 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms