RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MROH8Q9H579 483 aa17.95■□□□□ 0.46
LIG1-215ENST00000597901 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
LIG1-215ENST00000597901 BAZ2AQ9UIF9 1905 aaKnown RBP17.95■□□□□ 0.46
LIG1-215ENST00000597901 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 TFAP4Q01664 338 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 TMEM132BQ14DG7 1078 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 MCMDC2Q4G0Z9 681 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 FAM47AQ5JRC9 791 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 VPS53Q5VIR6 699 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 NPLOC4Q8TAT6 608 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 CEP95Q96GE4 821 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 FAM227BQ96M60 508 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 INCENPQ9NQS7 918 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 FLRT1Q9NZU1 646 aa17.94■□□□□ 0.46
LIG1-215ENST00000597901 TSPY3P0CV98 308 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 TSPY8P0CW00 308 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 ALX1Q15699 326 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
LIG1-215ENST00000597901 MFSD14CQ5VZR4 134 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 DPP9Q86TI2 863 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 NCAPG2Q86XI2 1143 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 PAWRQ96IZ0 340 aaKnown RBP17.93■□□□□ 0.46
LIG1-215ENST00000597901 NUP88Q99567 741 aaPredicted RBP17.93■□□□□ 0.46
LIG1-215ENST00000597901 OSBPL3Q9H4L5 887 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 PPP1R9AQ9ULJ8 1098 aa17.93■□□□□ 0.46
LIG1-215ENST00000597901 MYH7P12883 1935 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 H0YGN5 161 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 VWA5AO00534 786 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 TTLL1O95922 423 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 NDUFB10O96000 172 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 CCND3P30281 292 aaPredicted RBP17.92■□□□□ 0.46
LIG1-215ENST00000597901 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 ANKLE1Q8NAG6 615 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 OGDHLQ9ULD0 1010 aa17.92■□□□□ 0.46
LIG1-215ENST00000597901 BRCA2P51587 3418 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 A0A0D9SFI3 127 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 COBLO75128 1261 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 SLC25A27O95847 323 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 IGHA2P01877 340 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 FGAP02671 866 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 ADORA2AP29274 412 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 STAT3P40763 770 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 NMIQ13287 307 aaPredicted RBP17.91■□□□□ 0.46
LIG1-215ENST00000597901 LHX8Q68G74 356 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 NECAB2Q7Z6G3 386 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 RIOX2Q8IUF8 465 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 ABRAQ8N0Z2 381 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIG1-215ENST00000597901 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
LIG1-215ENST00000597901 SDSP20132 328 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 CYP2C19P33261 490 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
LIG1-215ENST00000597901 PRPF38AQ8NAV1 312 aaKnown RBP17.9■□□□□ 0.46
LIG1-215ENST00000597901 REPS2Q8NFH8 660 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 DIS3LQ8TF46 1054 aaKnown RBP17.9■□□□□ 0.46
LIG1-215ENST00000597901 SLF1Q9BQI6 1058 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 NR2E3Q9Y5X4 410 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 PLXNB2O15031 1838 aa17.9■□□□□ 0.46
LIG1-215ENST00000597901 FGRP09769 529 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 HSPD1P10809 573 aaKnown RBP17.89■□□□□ 0.45
LIG1-215ENST00000597901 FCER1AP12319 257 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 SLFN13Q68D06 897 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 GMCL1P1Q8NEA9 526 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 NBPF3Q9H094 633 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 IL17RBQ9NRM6 502 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 SLC5A4Q9NY91 659 aa17.89■□□□□ 0.45
LIG1-215ENST00000597901 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
LIG1-215ENST00000597901 MKI67P46013 3256 aaKnown RBP17.89■□□□□ 0.45
LIG1-215ENST00000597901 OLFML2BQ68BL8 750 aa17.88■□□□□ 0.45
LIG1-215ENST00000597901 ZNF589Q86UQ0 364 aaPredicted RBP17.88■□□□□ 0.45
LIG1-215ENST00000597901 LRRC47Q8N1G4 583 aaKnown RBP17.88■□□□□ 0.45
LIG1-215ENST00000597901 FEM1BQ9UK73 627 aa17.88■□□□□ 0.45
LIG1-215ENST00000597901 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 ORC4O43929 436 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 EVI5O60447 810 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
LIG1-215ENST00000597901 ZBED4O75132 1171 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 BMP3P12645 472 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 CNGA1P29973 690 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
LIG1-215ENST00000597901 TRPV1Q8NER1 839 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 KIFC2Q96AC6 838 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 MMP19Q99542 508 aa17.87■□□□□ 0.45
LIG1-215ENST00000597901 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
LIG1-215ENST00000597901 KCTD2Q14681 263 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 C11orf49Q9H6J7 331 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 STX8Q9UNK0 236 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 RIPK3Q9Y572 518 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 PLIN4Q96Q06 1357 aa17.86■□□□□ 0.45
LIG1-215ENST00000597901 ATP2A1O14983 1001 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 NMT2O60551 498 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 PGK2P07205 417 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 MCCP23508 829 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 COPB2P35606 906 aa17.85■□□□□ 0.45
LIG1-215ENST00000597901 MFAP1P55081 439 aaKnown RBP17.85■□□□□ 0.45
LIG1-215ENST00000597901 PRAMEF19Q5SWL8 479 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms