RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SEPT4O43236 478 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 SLC25A27O95847 323 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 CHGBP05060 677 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 FCER1AP12319 257 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 EEF2P13639 858 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 UBE3CQ15386 1083 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 C16orf86Q6ZW13 317 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
CHMP2A-202ENST00000596708 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 IGHA2P01877 340 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 TMEM132BQ14DG7 1078 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 MMP19Q99542 508 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
CHMP2A-202ENST00000596708 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 STAT3P40763 770 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 CTR9Q6PD62 1173 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 FBXO28Q9NVF7 368 aa12.68□□□□□ -0.38
CHMP2A-202ENST00000596708 PGK2P07205 417 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 ADCYAP1R1P41586 468 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 KCTD2Q14681 263 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 LRRC41Q15345 812 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 TRIM60Q495X7 471 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 ARPP21Q9UBL0 812 aaPredicted RBP12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
CHMP2A-202ENST00000596708 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 VWA5AO00534 786 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 RARBP10826 455 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 SLC4A3P48751 1232 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
CHMP2A-202ENST00000596708 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 COPB2P35606 906 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 SHHQ15465 462 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 RNF180Q86T96 592 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 BADQ92934 168 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 STRBPQ96SI9 672 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 NRBP1Q9UHY1 535 aa12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-202ENST00000596708 COL6A3P12111 3177 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 PGK1P00558 417 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 SNX17Q15036 470 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 ZNF792Q3KQV3 632 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 SH3RF1Q7Z6J0 888 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 SLF1Q9BQI6 1058 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
CHMP2A-202ENST00000596708 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 F5H6K3 240 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 APPP05067 770 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 AKR1A1P14550 325 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 RASA1P20936 1047 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 TLE2Q04725 743 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 KLRC3Q07444 240 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 C1orf53Q5VUE5 145 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 ZNF444Q8N0Y2 327 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 REPS2Q8NFH8 660 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 NYAP2Q9P242 653 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 ZNF214Q9UL59 606 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 TACC3Q9Y6A5 838 aa12.63□□□□□ -0.39
CHMP2A-202ENST00000596708 TRIM43BA6NCK2 446 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 ZBED4O75132 1171 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 TDO2P48775 406 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms