RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 BLZF1Q9H2G9 400 aa25.82■■□□□ 1.72
SRRM1-222ENST00000596378 ATP2B4P23634 1241 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 CDC25AP30304 524 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 WWC2Q6AWC2 1192 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 MTERF4Q7Z6M4 381 aaKnown RBP25.81■■□□□ 1.72
SRRM1-222ENST00000596378 TEX11Q8IYF3 940 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 RBM17Q96I25 401 aaKnown RBP25.81■■□□□ 1.72
SRRM1-222ENST00000596378 PCDHA4Q9UN74 947 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 TRAPPC10P48553 1259 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 DDR1Q08345 913 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 MFSD14BQ5SR56 506 aa25.81■■□□□ 1.72
SRRM1-222ENST00000596378 DDX60LQ5H9U9 1706 aaKnown RBP25.8■■□□□ 1.72
SRRM1-222ENST00000596378 IL1R1P14778 569 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 NCBP1Q09161 790 aaKnown RBP25.8■■□□□ 1.72
SRRM1-222ENST00000596378 E2F4Q16254 413 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 HEATR3Q7Z4Q2 680 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 SNED1Q8TER0 1413 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 CALML3P27482 149 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 CCDC34Q96HJ3 373 aa25.8■■□□□ 1.72
SRRM1-222ENST00000596378 GPR75-ASB3A0A0A6YYF3 556 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 NRDCO43847 1150 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 ONECUT3O60422 494 aaPredicted RBP25.79■■□□□ 1.72
SRRM1-222ENST00000596378 COBLO75128 1261 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 CDK8P49336 464 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 TBC1D16Q8TBP0 767 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 TCP11L1Q9NUJ3 509 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 FLT1P17948 1338 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 PSDA5PKW4 1024 aaPredicted RBP25.79■■□□□ 1.72
SRRM1-222ENST00000596378 C4orf32Q8N8J7 132 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 TMX1Q9H3N1 280 aa25.79■■□□□ 1.72
SRRM1-222ENST00000596378 ERCC5P28715 1186 aaPredicted RBP25.78■■□□□ 1.72
SRRM1-222ENST00000596378 ANKRD7Q92527 254 aa25.78■■□□□ 1.72
SRRM1-222ENST00000596378 EYA3Q99504 573 aa25.78■■□□□ 1.72
SRRM1-222ENST00000596378 MTRQ99707 1265 aa25.78■■□□□ 1.72
SRRM1-222ENST00000596378 SYNRGQ9UMZ2 1314 aa25.78■■□□□ 1.72
SRRM1-222ENST00000596378 C6orf229H3BNL8 230 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 CUL4BQ13620 913 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 DHX8Q14562 1220 aaKnown RBP25.77■■□□□ 1.72
SRRM1-222ENST00000596378 SH3GLB2Q9NR46 395 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 M0R2N6 131 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 KCNJ6P48051 423 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 RHBDL3P58872 404 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 TBX2Q13207 712 aaPredicted RBP25.77■■□□□ 1.72
SRRM1-222ENST00000596378 PDXDC2PQ6P474 469 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 PCDHA6Q9UN73 950 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 PCDHA8Q9Y5H6 950 aa25.77■■□□□ 1.72
SRRM1-222ENST00000596378 PALM3A6NDB9 673 aaPredicted RBP25.76■■□□□ 1.71
SRRM1-222ENST00000596378 GNAQP50148 359 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 C16orf86Q6ZW13 317 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 TMEM139Q8IV31 216 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 IQUBQ8NA54 791 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 KIF18AQ8NI77 898 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 GSDMAQ96QA5 445 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 PPP1R3GB7ZBB8 358 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 STXBP3O00186 592 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 ADKP55263 362 aaKnown RBP25.76■■□□□ 1.71
SRRM1-222ENST00000596378 SYT10Q6XYQ8 523 aa25.76■■□□□ 1.71
SRRM1-222ENST00000596378 CCDC194A0A1B0GVG4 234 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 IGSF3O75054 1194 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 INF2Q27J81 1249 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 CCDC178Q5BJE1 867 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 MYH1P12882 1939 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 KLRF2D3W0D1 207 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 POLRMTO00411 1230 aaKnown RBP25.75■■□□□ 1.71
SRRM1-222ENST00000596378 RIMBP2O15034 1052 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 SPECC1LQ69YQ0 1117 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 TMEM60Q9H2L4 133 aa25.75■■□□□ 1.71
SRRM1-222ENST00000596378 TRPC5Q9UL62 973 aaPredicted RBP25.75■■□□□ 1.71
SRRM1-222ENST00000596378 PP2D1A8MPX8 630 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 TEX33O43247 280 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 BBOX1O75936 387 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 TRIM37O94972 964 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 KARSQ15046 597 aaKnown RBP25.74■■□□□ 1.71
SRRM1-222ENST00000596378 SPATA1Q5VX52 437 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 USP17L2Q6R6M4 530 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 BARHL2Q9NY43 387 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.74■■□□□ 1.71
SRRM1-222ENST00000596378 ZNF215Q9UL58 517 aaPredicted RBP25.74■■□□□ 1.71
SRRM1-222ENST00000596378 CTNND2Q9UQB3 1225 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 V9GYY5 206 aaPredicted RBP25.74■■□□□ 1.71
SRRM1-222ENST00000596378 NR1I3Q14994 352 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 APTXQ7Z2E3 356 aaKnown RBP25.74■■□□□ 1.71
SRRM1-222ENST00000596378 HOMER1Q86YM7 354 aa25.74■■□□□ 1.71
SRRM1-222ENST00000596378 GTF2IP78347 998 aa25.73■■□□□ 1.71
SRRM1-222ENST00000596378 PDCL2Q8N4E4 241 aa25.73■■□□□ 1.71
SRRM1-222ENST00000596378 TC2NQ8N9U0 490 aa25.73■■□□□ 1.71
SRRM1-222ENST00000596378 CEP95Q96GE4 821 aa25.73■■□□□ 1.71
SRRM1-222ENST00000596378 PODXL2Q9NZ53 605 aa25.73■■□□□ 1.71
SRRM1-222ENST00000596378 NT5C2P49902 561 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 ARL6IP4Q66PJ3 421 aaKnown RBP25.72■■□□□ 1.71
SRRM1-222ENST00000596378 A0A1B0GTH6 734 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 F8W031 263 aaPredicted RBP25.72■■□□□ 1.71
SRRM1-222ENST00000596378 HOXA10P31260 410 aaPredicted RBP25.72■■□□□ 1.71
SRRM1-222ENST00000596378 HSPA1LP34931 641 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 CCDC148Q8NFR7 591 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 NEDD1Q8NHV4 660 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 ZNF287Q9HBT7 754 aa25.72■■□□□ 1.71
SRRM1-222ENST00000596378 KIF2AO00139 706 aaPredicted RBP25.71■■□□□ 1.71
SRRM1-222ENST00000596378 LONP1P36776 959 aaKnown RBP25.71■■□□□ 1.71
SRRM1-222ENST00000596378 PICALMQ13492 652 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms