RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 FAM177BA6PVY3 158 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 PRC1O43663 620 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 STK10O94804 968 aaKnown RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 A1BGP04217 495 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 GHRP10912 638 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 TATP17735 454 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 ATP5JP18859 108 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SYT1P21579 422 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 FOXK1P85037 733 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SESTD1Q86VW0 696 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 UNC5CLQ8IV45 518 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF483Q8TF39 744 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC51Q96ER9 411 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC28BQ9BUN5 200 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 CORO1CQ9ULV4 474 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 MTMR6Q9Y217 621 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SALL3Q9BXA9 1300 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 GOLGA6L10A0A0M3HER8 536 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 HIP1O00291 1037 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 KINO60870 393 aaKnown RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SASH3O75995 380 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 GCLCP48506 637 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 FNTAP49354 379 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SNCBQ16143 134 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 PKN2Q16513 984 aaKnown RBP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRIT3-202ENST00000594814 TRIM65Q6PJ69 517 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 SAMD3Q8N6K7 520 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 CNNM3Q8NE01 707 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 ANKK1Q8NFD2 765 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 RUFY2Q8WXA3 655 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 TMEM87BQ96K49 555 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 C1orf74Q96LT6 269 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 PARD6BQ9BYG5 372 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 VCPKMTQ9H867 229 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 TOMM22Q9NS69 142 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 PDRG1Q9NUG6 133 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 VPS18Q9P253 973 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 FAM169AQ9Y6X4 670 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 AFF2P51816 1311 aa4.92□□□□□ -1.62
LRIT3-202ENST00000594814 A0A1W2PQ27 194 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 A0A1W2PQ64 194 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 A0A1W2PQD8 194 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 MEFVO15553 781 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 FERP16591 822 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 PSMA5P28066 241 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 FOSBP53539 338 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ALS2CLQ60I27 953 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 NUGGCQ68CJ6 796 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CYP26C1Q6V0L0 522 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 HOMER1Q86YM7 354 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 IFNL2Q8IZJ0 200 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 FAM76AQ8TAV0 307 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 LLPHQ9BRT6 129 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CRACR2AQ9BSW2 395 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 POLR3CQ9BUI4 534 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 USP21Q9UK80 565 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 USP42Q9H9J4 1324 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 JCADQ9P266 1359 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 EIF3HO15372 352 aaKnown RBP eCLIP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ADCY9O60503 1353 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 RASSF9O75901 435 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ABCC6O95255 1503 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 MYL6BP14649 208 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 TNFRSF8P28908 595 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 TM4SF4P48230 202 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 AKAP17AQ02040 695 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CKAP4Q07065 602 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 LRMPQ12912 555 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ZRSR2Q15696 482 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CCDC70Q6NSX1 233 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 TLDC1Q6P9B6 456 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 UBN2Q6ZU65 1347 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 SYNE4Q8N205 404 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 HDAC7Q8WUI4 952 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ZKSCAN4Q969J2 545 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 REPIN1Q9BWE0 567 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF112Q9UJU3 913 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CDC23Q9UJX2 597 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 LZTS1Q9Y250 596 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 GMEB1Q9Y692 573 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 MRC1P22897 1456 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 RFX7Q2KHR2 1363 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 SH3TC1Q8TE82 1336 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 GSTA1P08263 222 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 CHMP4BP1P59074 171 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 TGFB2P61812 414 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ACTN3Q08043 901 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ELOAQ14241 798 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 SEPT2Q15019 361 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 NFE2Q16621 373 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ERAP2Q6P179 960 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 EIF1ADQ8N9N8 165 aaKnown RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 N4BP2L2Q92802 583 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 SMARCC1Q92922 1105 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ZNF396Q96N95 335 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-202ENST00000594814 MEIS3Q99687 375 aa4.91□□□□□ -1.62
LRIT3-202ENST00000594814 ST7Q9NRC1 585 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms