RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NBPF3Q9H094 633 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 SPATC1LQ9H0A9 340 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 RNF208Q9H0X6 261 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 UNC93B1Q9H1C4 597 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 IL17RBQ9NRM6 502 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 SYNPO2Q9UMS6 1093 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 PARP14Q460N5 1801 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 GJB1P08034 283 aa21.93■■□□□ 1.1
SHKBP1-202ENST00000593764 IL25Q9H293 177 aa21.93■■□□□ 1.1
SHKBP1-202ENST00000593764 PPP1R9AQ9ULJ8 1098 aa21.93■■□□□ 1.1
SHKBP1-202ENST00000593764 MYH4Q9Y623 1939 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 A0A0G2JMZ2 1700 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 TSPY2A6NKD2 308 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 NMT2O60551 498 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 PTPREP23469 700 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 HAND2P61296 217 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 TRIM32Q13049 653 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 TMEM132BQ14DG7 1078 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 SAMD1Q6SPF0 538 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 GMCL1P1Q8NEA9 526 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 TRIB2Q92519 343 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 SHISA4Q96DD7 197 aa21.92■■□□□ 1.1
SHKBP1-202ENST00000593764 VWA5AO00534 786 aa21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 RANBP6O60518 1105 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 HMGCRP04035 888 aa21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 GJA8P48165 433 aa21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 NOVP48745 357 aa21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 MAP2K5Q13163 448 aa21.91■■□□□ 1.1
SHKBP1-202ENST00000593764 SLC15A5A6NIM6 579 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 ERCC3P19447 782 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 RGS2P41220 211 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 GRB14Q14449 540 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 WDR78Q5VTH9 848 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 SHCBP1Q8NEM2 672 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 REPS2Q8NFH8 660 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 NKX2-3Q8TAU0 364 aa21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 PAK6Q9NQU5 681 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-202ENST00000593764 PLS1Q14651 629 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 CCL14Q16627 93 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 AKNAD1Q5T1N1 836 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 TBC1D10CQ8IV04 446 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 STAG1Q8WVM7 1258 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 SLF1Q9BQI6 1058 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 DSCC1Q9BVC3 393 aa21.89■■□□□ 1.09
SHKBP1-202ENST00000593764 HOXC6P09630 235 aa21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 MAP3K21Q5TCX8 1036 aa21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 SLFN13Q68D06 897 aa21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 PRPF38AQ8NAV1 312 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 U2AF1L4Q8WU68 220 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 APBA2Q99767 749 aa21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 ZNF214Q9UL59 606 aaPredicted RBP21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 IVNS1ABPQ9Y6Y0 642 aa21.88■■□□□ 1.09
SHKBP1-202ENST00000593764 STRNO43815 780 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 SGPL1O95470 568 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 PCP11498 1178 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 CHMLP26374 656 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 RRP12Q5JTH9 1297 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 PPP4R3BQ5MIZ7 849 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 MFSD6Q6ZSS7 791 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 TRMT44Q8IYL2 757 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 MROH8Q9H579 483 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 TOMM22Q9NS69 142 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 TCP11L1Q9NUJ3 509 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 FLRT1Q9NZU1 646 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 STX8Q9UNK0 236 aa21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 COL11A1P12107 1806 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-202ENST00000593764 RPTORQ8N122 1335 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 ZNF213O14771 459 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 BMP3P12645 472 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 NCAPG2Q86XI2 1143 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 RIOX2Q8IUF8 465 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 NPLOC4Q8TAT6 608 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 GMCL1Q96IK5 515 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 DEFB118Q96PH6 123 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 FEM1BQ9UK73 627 aa21.86■■□□□ 1.09
SHKBP1-202ENST00000593764 SLC25A27O95847 323 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 IGHA2P01877 340 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 ZKSCAN1P17029 563 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 MCCP23508 829 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 ADORA2AP29274 412 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 STAT3P40763 770 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 CACNB2Q08289 660 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 CENPQQ7L2Z9 268 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 UBE2Q1Q7Z7E8 422 aa21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 HMX1Q9NP08 348 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-202ENST00000593764 NEDD4P46934 1319 aa21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 COBLO75128 1261 aa21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 PRKAR2AP13861 404 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 ABRAQ8N0Z2 381 aa21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 KIFC2Q96AC6 838 aa21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 CRISPLD2Q9H0B8 497 aa21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 RNF41Q9H4P4 317 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-202ENST00000593764 RAD50Q92878 1312 aa21.83■■□□□ 1.09
SHKBP1-202ENST00000593764 TMEM232C9JQI7 657 aa21.83■■□□□ 1.09
SHKBP1-202ENST00000593764 ATP2A1O14983 1001 aa21.83■■□□□ 1.09
SHKBP1-202ENST00000593764 SLC1A4P43007 532 aa21.83■■□□□ 1.09
SHKBP1-202ENST00000593764 RCSD1Q6JBY9 416 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms