RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 ZNF589Q86UQ0 364 aaPredicted RBP27.6■■■□□ 2.01
CLPTM1-212ENST00000591304 UNC93B1Q9H1C4 597 aa27.6■■■□□ 2.01
CLPTM1-212ENST00000591304 ADAMTS5Q9UNA0 930 aa27.6■■■□□ 2.01
CLPTM1-212ENST00000591304 BRCA2P51587 3418 aa27.6■■■□□ 2.01
CLPTM1-212ENST00000591304 TSPY2A6NKD2 308 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 ORC4O43929 436 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 FGRP09769 529 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 PCP11498 1178 aaKnown RBP27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 PTPREP23469 700 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 FAM47AQ5JRC9 791 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 FAM83BQ5T0W9 1011 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 CWC27Q6UX04 472 aaKnown RBP27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 APBA2Q99767 749 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 MOV10L1Q9BXT6 1211 aaKnown RBP27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 MROH8Q9H579 483 aa27.59■■■□□ 2.01
CLPTM1-212ENST00000591304 PDE4AP27815 886 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 MAP2K5Q13163 448 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 TTC22Q5TAA0 569 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 GMCL1P1Q8NEA9 526 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 ATG4CQ96DT6 458 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 PPP1R9AQ9ULJ8 1098 aa27.58■■■□□ 2.01
CLPTM1-212ENST00000591304 COL11A1P12107 1806 aaPredicted RBP27.57■■■□□ 2
CLPTM1-212ENST00000591304 NDUFB10O96000 172 aa27.57■■■□□ 2
CLPTM1-212ENST00000591304 ZKSCAN1P17029 563 aaPredicted RBP27.57■■■□□ 2
CLPTM1-212ENST00000591304 HMX1Q9NP08 348 aaPredicted RBP27.57■■■□□ 2
CLPTM1-212ENST00000591304 PAK6Q9NQU5 681 aaPredicted RBP27.57■■■□□ 2
CLPTM1-212ENST00000591304 RPTORQ8N122 1335 aa27.57■■■□□ 2
CLPTM1-212ENST00000591304 RANBP6O60518 1105 aaKnown RBP27.56■■■□□ 2
CLPTM1-212ENST00000591304 SGPL1O95470 568 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 SLC25A27O95847 323 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 GRB14Q14449 540 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 PLS1Q14651 629 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 PRPF38AQ8NAV1 312 aaKnown RBP27.56■■■□□ 2
CLPTM1-212ENST00000591304 U2AF1L4Q8WU68 220 aaKnown RBP27.56■■■□□ 2
CLPTM1-212ENST00000591304 TRIB2Q92519 343 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 SLF1Q9BQI6 1058 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 PDE4DIPQ5VU43 2346 aa27.56■■■□□ 2
CLPTM1-212ENST00000591304 VWA5AO00534 786 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 HOXC6P09630 235 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 COPB2P35606 906 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 NT5C2P49902 561 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 SAMD1Q6SPF0 538 aaPredicted RBP27.55■■■□□ 2
CLPTM1-212ENST00000591304 RNF41Q9H4P4 317 aaPredicted RBP27.55■■■□□ 2
CLPTM1-212ENST00000591304 FBXO28Q9NVF7 368 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 ZNF236Q9UL36 1845 aa27.55■■■□□ 2
CLPTM1-212ENST00000591304 ERCC3P19447 782 aa27.54■■■□□ 2
CLPTM1-212ENST00000591304 ABRAQ8N0Z2 381 aa27.54■■■□□ 2
CLPTM1-212ENST00000591304 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.54■■■□□ 2
CLPTM1-212ENST00000591304 TOMM22Q9NS69 142 aa27.54■■■□□ 2
CLPTM1-212ENST00000591304 SLC5A4Q9NY91 659 aa27.54■■■□□ 2
CLPTM1-212ENST00000591304 TMEM132BQ14DG7 1078 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 MFSD6Q6ZSS7 791 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 NCAPG2Q86XI2 1143 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 SHISA4Q96DD7 197 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 DEFB118Q96PH6 123 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 FEM1BQ9UK73 627 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 STX8Q9UNK0 236 aa27.53■■■□□ 2
CLPTM1-212ENST00000591304 ZNF213O14771 459 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 AKNAD1Q5T1N1 836 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 MAP3K21Q5TCX8 1036 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 SLFN13Q68D06 897 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 DPP9Q86TI2 863 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 RIOX2Q8IUF8 465 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 LRRC47Q8N1G4 583 aaKnown RBP27.52■■■□□ 2
CLPTM1-212ENST00000591304 NUP88Q99567 741 aaPredicted RBP27.52■■■□□ 2
CLPTM1-212ENST00000591304 DSCC1Q9BVC3 393 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 INCENPQ9NQS7 918 aa27.52■■■□□ 2
CLPTM1-212ENST00000591304 TFRCP02786 760 aaKnown RBP27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 FDX1P10109 184 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 BMP3P12645 472 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 PRKAR2AP13861 404 aaKnown RBP27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 STAT3P40763 770 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 MFSD14CQ5VZR4 134 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 RUFY2Q8WXA3 655 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 GMCL1Q96IK5 515 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 IL17RBQ9NRM6 502 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 CTNNA3Q9UI47 895 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 CTDP1Q9Y5B0 961 aaPredicted RBP27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 LAMA4Q16363 1823 aa27.51■■□□□ 1.99
CLPTM1-212ENST00000591304 ZNFX1Q9P2E3 1918 aaKnown RBP27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 ZBED4O75132 1171 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 FCER1AP12319 257 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 GSPT1P15170 499 aaKnown RBP27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 NOVP48745 357 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 RRP12Q5JTH9 1297 aaKnown RBP27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 STAG1Q8WVM7 1258 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 CRISPLD2Q9H0B8 497 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 TCP11L1Q9NUJ3 509 aa27.5■■□□□ 1.99
CLPTM1-212ENST00000591304 RAD50Q92878 1312 aa27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 ADORA2AP29274 412 aa27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 HAND2P61296 217 aa27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 PRPF38BQ5VTL8 546 aaKnown RBP27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 REPS2Q8NFH8 660 aa27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 CHURC1Q8WUH1 139 aa27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 ZNF214Q9UL59 606 aaPredicted RBP27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 MKI67P46013 3256 aaKnown RBP27.49■■□□□ 1.99
CLPTM1-212ENST00000591304 ATP2A1O14983 1001 aa27.48■■□□□ 1.99
CLPTM1-212ENST00000591304 SLC1A4P43007 532 aa27.48■■□□□ 1.99
CLPTM1-212ENST00000591304 TRIM32Q13049 653 aa27.48■■□□□ 1.99
CLPTM1-212ENST00000591304 CCL14Q16627 93 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms