RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 MANSC4A6NHS7 340 aaPredicted RBP19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 CDKL5O76039 1030 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 VCAM1P19320 739 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 SMARCA1P28370 1054 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 ZNF543Q08ER8 600 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 ZYXQ15942 572 aaKnown RBP19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 CCDC96Q2M329 555 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 REM2Q8IYK8 340 aaPredicted RBP19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 EMILIN3Q9NT22 766 aa19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.76■□□□□ 0.75
SCAMP4-211ENST00000588907 PLA2G6O60733 806 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 GJA5P36382 358 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 INHBEP58166 350 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 ME3Q16798 604 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 NOL8Q76FK4 1167 aaKnown RBP19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 CHURC1Q8WUH1 139 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 GTF3C6Q969F1 213 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 FEM1BQ9UK73 627 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 HPS5Q9UPZ3 1129 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 SLC45A1Q9Y2W3 748 aa19.75■□□□□ 0.75
SCAMP4-211ENST00000588907 PALM3A6NDB9 673 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 CPLX1O14810 134 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 CD2BP2O95400 341 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 STAT2P52630 851 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 SREBF2Q12772 1141 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 NOGQ13253 232 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 DEFB115Q30KQ5 88 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 SPICE1Q8N0Z3 855 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 TMX3Q96JJ7 454 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 MYL10Q9BUA6 226 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 RBM27Q9P2N5 1060 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 MAD2L2Q9UI95 211 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 AGTPBP1Q9UPW5 1226 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 MYPNQ86TC9 1320 aa19.74■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L15C9J2P7 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L13C9JLJ4 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L11C9JVI0 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L18D6R9N7 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L22D6RA61 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L17D6RBQ6 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L19D6RCP7 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L20D6RJB6 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 USP17L24Q0WX57 530 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 PAXIP1Q6ZW49 1069 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 LLPHQ9BRT6 129 aaKnown RBP19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 RPAP3Q9H6T3 665 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 ZCCHC17Q9NP64 241 aaKnown RBP19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 PNMA3Q9UL41 463 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 MTMR7Q9Y216 660 aa19.73■□□□□ 0.75
SCAMP4-211ENST00000588907 CCL15-CCL14A0A0B4J2E2 113 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 TESPA1A2RU30 521 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 KLRF2D3W0D1 207 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 FDX1P10109 184 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 HOXA7P31268 230 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 SCRN1Q12765 414 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 STK3Q13188 491 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 CCL15Q16663 113 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 FAM83BQ5T0W9 1011 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 BTNL9Q6UXG8 535 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 GADL1Q6ZQY3 521 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 TMTC3Q6ZXV5 915 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 MS4A4AQ96JQ5 239 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 LARP6Q9BRS8 491 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 SPZ1Q9BXG8 430 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 TANGO6Q9C0B7 1094 aa19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 RBM19Q9Y4C8 960 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-211ENST00000588907 FAM155AB1AL88 458 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 RXRAP19793 462 aa19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 CCT2P78371 535 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 IKQ13123 557 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 OTUD7BQ6GQQ9 843 aa19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 ANKRD23Q86SG2 305 aa19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 GTF3C2Q8WUA4 911 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-211ENST00000588907 TMEM232C9JQI7 657 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 IFNAR1P17181 557 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 KCTD1Q719H9 257 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 TRIM22Q8IYM9 498 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 PRPF38AQ8NAV1 312 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 INTS4Q96HW7 963 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 SLF1Q9BQI6 1058 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 PNMA2Q9UL42 364 aa19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 FRMPD2Q68DX3 1309 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-211ENST00000588907 FLOT1O75955 427 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 LARGE1O95461 756 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 HSPA6P17066 643 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 OSBPP22059 807 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 IRX3P78415 501 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 AKAP17AQ02040 695 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 TRAF1Q13077 416 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 CUL4AQ13619 759 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 MOGSQ13724 837 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 CATSPERGQ6ZRH7 1159 aa19.69■□□□□ 0.74
SCAMP4-211ENST00000588907 RAB11FIP4Q86YS3 637 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms