RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LENG1Q96BZ8 264 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-225ENST00000586385 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
BRCA1-225ENST00000586385 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 PRKAG2Q9UGJ0 569 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 PHF24Q9UPV7 400 aa14.37□□□□□ -0.11
BRCA1-225ENST00000586385 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 ZNF865P0CJ78 1059 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 EEF2P13639 858 aaKnown RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 ZNF792Q3KQV3 632 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 C16orf86Q6ZW13 317 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 KIF1BPQ96EK5 621 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 BOLA2Q9H3K6 86 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 ARHGEF10LQ9HCE6 1279 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-225ENST00000586385 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
BRCA1-225ENST00000586385 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 USP17L21D6R901 530 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 PGK1P00558 417 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 FCER1AP12319 257 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 HSP90AB4PQ58FF6 505 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 CLASRPQ8N2M8 674 aaKnown RBP14.35□□□□□ -0.11
BRCA1-225ENST00000586385 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 PARP14Q460N5 1801 aa14.35□□□□□ -0.11
BRCA1-225ENST00000586385 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 VWA5AO00534 786 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 ADAMTS4O75173 837 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 SLC25A27O95847 323 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
BRCA1-225ENST00000586385 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
BRCA1-225ENST00000586385 CTR9Q6PD62 1173 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 MYLIPQ8WY64 445 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 MMP19Q99542 508 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 HAUS7Q99871 368 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 ZBTB40Q9NUA8 1239 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 SLC5A4Q9NY91 659 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
BRCA1-225ENST00000586385 A0A1W2PQ45 241 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-225ENST00000586385 A0A1W2PQY0 241 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 KIAA0355O15063 1070 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 ATP5JP18859 108 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 MAFAQ8NHW3 353 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-225ENST00000586385 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-225ENST00000586385 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
BRCA1-225ENST00000586385 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
BRCA1-225ENST00000586385 DIS3Q9Y2L1 958 aaKnown RBP14.33□□□□□ -0.12
BRCA1-225ENST00000586385 CLTBP09497 229 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 RARBP10826 455 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 STAT3P40763 770 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-225ENST00000586385 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-225ENST00000586385 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 KANSL2Q9H9L4 492 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
BRCA1-225ENST00000586385 VCANP13611 3396 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 PRUNE2Q8WUY3 3088 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 BAZ2AQ9UIF9 1905 aaKnown RBP14.31□□□□□ -0.12
BRCA1-225ENST00000586385 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 DNAJC25-GNG10A0A024R161 153 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 MYADML2A6NDP7 307 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 ADCY6O43306 1168 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-225ENST00000586385 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 CCSAPQ6IQ19 270 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-225ENST00000586385 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 FGD4Q96M96 766 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 TACC3Q9Y6A5 838 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 SLC4A4Q9Y6R1 1079 aa14.31□□□□□ -0.12
BRCA1-225ENST00000586385 PQBP1O60828 265 aaKnown RBP14.3□□□□□ -0.12
BRCA1-225ENST00000586385 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 AKR1A1P14550 325 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 RASA1P20936 1047 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 KCTD2Q14681 263 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 SYNRGQ9UMZ2 1314 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
BRCA1-225ENST00000586385 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-225ENST00000586385 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
BRCA1-225ENST00000586385 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-225ENST00000586385 NDUFB10O96000 172 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 ACLYP53396 1101 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 RNF180Q86T96 592 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 MIER1Q8N108 512 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 USP38Q8NB14 1042 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 RNPC3Q96LT9 517 aaKnown RBP14.29□□□□□ -0.12
BRCA1-225ENST00000586385 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
BRCA1-225ENST00000586385 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
BRCA1-225ENST00000586385 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms