RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NDUFB10O96000 172 aa24.23■■□□□ 1.47
SS18-224ENST00000584083 XRCC5P13010 732 aaKnown RBP24.23■■□□□ 1.47
SS18-224ENST00000584083 MOV10L1Q9BXT6 1211 aaKnown RBP24.23■■□□□ 1.47
SS18-224ENST00000584083 SPATC1LQ9H0A9 340 aa24.23■■□□□ 1.47
SS18-224ENST00000584083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.23■■□□□ 1.47
SS18-224ENST00000584083 PLIN4Q96Q06 1357 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 RANBP6O60518 1105 aaKnown RBP24.22■■□□□ 1.47
SS18-224ENST00000584083 PTPREP23469 700 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 GJA8P48165 433 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 LRRC47Q8N1G4 583 aaKnown RBP24.22■■□□□ 1.47
SS18-224ENST00000584083 TRIB2Q92519 343 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 USP6NLQ92738 828 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 MKL1Q969V6 931 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 TOMM22Q9NS69 142 aa24.22■■□□□ 1.47
SS18-224ENST00000584083 SLC15A5A6NIM6 579 aa24.21■■□□□ 1.47
SS18-224ENST00000584083 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
SS18-224ENST00000584083 MAP2K5Q13163 448 aa24.21■■□□□ 1.47
SS18-224ENST00000584083 TTC22Q5TAA0 569 aa24.21■■□□□ 1.47
SS18-224ENST00000584083 TRMT44Q8IYL2 757 aaKnown RBP24.21■■□□□ 1.47
SS18-224ENST00000584083 PPP1R9AQ9ULJ8 1098 aa24.21■■□□□ 1.47
SS18-224ENST00000584083 HAND2P61296 217 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 TRIM32Q13049 653 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 RRP12Q5JTH9 1297 aaKnown RBP24.2■■□□□ 1.46
SS18-224ENST00000584083 U2AF1L4Q8WU68 220 aaKnown RBP24.2■■□□□ 1.46
SS18-224ENST00000584083 SHISA4Q96DD7 197 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 DEFB118Q96PH6 123 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 APBA2Q99767 749 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 SYNPO2Q9UMS6 1093 aa24.2■■□□□ 1.46
SS18-224ENST00000584083 ZMYM6O95789 1325 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 ORC4O43929 436 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 ERCC3P19447 782 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 TMEM132BQ14DG7 1078 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 PPP4R3BQ5MIZ7 849 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 NCAPG2Q86XI2 1143 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 SHCBP1Q8NEM2 672 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.19■■□□□ 1.46
SS18-224ENST00000584083 HMX1Q9NP08 348 aaPredicted RBP24.19■■□□□ 1.46
SS18-224ENST00000584083 ADAMTS5Q9UNA0 930 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 TACC3Q9Y6A5 838 aa24.19■■□□□ 1.46
SS18-224ENST00000584083 BRCA2P51587 3418 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 VWA5AO00534 786 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 SGPL1O95470 568 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 TFRCP02786 760 aaKnown RBP24.18■■□□□ 1.46
SS18-224ENST00000584083 GRB14Q14449 540 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 CCL14Q16627 93 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 SLFN13Q68D06 897 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 GMCL1P1Q8NEA9 526 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 SLF1Q9BQI6 1058 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 MROH8Q9H579 483 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 PAK6Q9NQU5 681 aaPredicted RBP24.18■■□□□ 1.46
SS18-224ENST00000584083 ISY1Q9ULR0 285 aaKnown RBP24.18■■□□□ 1.46
SS18-224ENST00000584083 STX8Q9UNK0 236 aa24.18■■□□□ 1.46
SS18-224ENST00000584083 ZNFX1Q9P2E3 1918 aaKnown RBP24.18■■□□□ 1.46
SS18-224ENST00000584083 RPTORQ8N122 1335 aa24.17■■□□□ 1.46
SS18-224ENST00000584083 STRNO43815 780 aa24.17■■□□□ 1.46
SS18-224ENST00000584083 GSPT1P15170 499 aaKnown RBP24.17■■□□□ 1.46
SS18-224ENST00000584083 NMT2O60551 498 aa24.16■■□□□ 1.46
SS18-224ENST00000584083 SLC25A27O95847 323 aa24.16■■□□□ 1.46
SS18-224ENST00000584083 FGRP09769 529 aa24.16■■□□□ 1.46
SS18-224ENST00000584083 PRKAR2AP13861 404 aaKnown RBP24.16■■□□□ 1.46
SS18-224ENST00000584083 DPP9Q86TI2 863 aa24.16■■□□□ 1.46
SS18-224ENST00000584083 PRPF38AQ8NAV1 312 aaKnown RBP24.16■■□□□ 1.46
SS18-224ENST00000584083 IL17RBQ9NRM6 502 aa24.16■■□□□ 1.46
SS18-224ENST00000584083 CTDP1Q9Y5B0 961 aaPredicted RBP24.16■■□□□ 1.46
SS18-224ENST00000584083 ZNF213O14771 459 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 ADORA2AP29274 412 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 STAT3P40763 770 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 AKNAD1Q5T1N1 836 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 MFSD6Q6ZSS7 791 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 KIFC2Q96AC6 838 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 CHMP4CQ96CF2 233 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 FEM1BQ9UK73 627 aa24.15■■□□□ 1.46
SS18-224ENST00000584083 HOXC6P09630 235 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 BMP3P12645 472 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 CACNB2Q08289 660 aaPredicted RBP24.14■■□□□ 1.45
SS18-224ENST00000584083 MAP3K21Q5TCX8 1036 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 MFSD14CQ5VZR4 134 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 RIOX2Q8IUF8 465 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 NPLOC4Q8TAT6 608 aa24.14■■□□□ 1.45
SS18-224ENST00000584083 LAMA4Q16363 1823 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 ZNF236Q9UL36 1845 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 ZBED4O75132 1171 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 PCP11498 1178 aaKnown RBP24.13■■□□□ 1.45
SS18-224ENST00000584083 FCER1AP12319 257 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 REPS2Q8NFH8 660 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 NBPF3Q9H094 633 aa24.13■■□□□ 1.45
SS18-224ENST00000584083 RNF41Q9H4P4 317 aaPredicted RBP24.13■■□□□ 1.45
SS18-224ENST00000584083 ZNF214Q9UL59 606 aaPredicted RBP24.13■■□□□ 1.45
SS18-224ENST00000584083 MKI67P46013 3256 aaKnown RBP24.13■■□□□ 1.45
SS18-224ENST00000584083 FARP2O94887 1054 aaPredicted RBP24.12■■□□□ 1.45
SS18-224ENST00000584083 CAPN2P17655 700 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 MCCP23508 829 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 SLC1A4P43007 532 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 SLC4A3P48751 1232 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 IKQ13123 557 aaPredicted RBP24.12■■□□□ 1.45
SS18-224ENST00000584083 TBC1D10CQ8IV04 446 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 ABRAQ8N0Z2 381 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 STAG1Q8WVM7 1258 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 GMCL1Q96IK5 515 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 DSCC1Q9BVC3 393 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms