RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 PDE6AP16499 860 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 RGS2P41220 211 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
CRLF3-205ENST00000583805 PDE4CQ08493 712 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 SLC9C2Q5TAH2 1124 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 LBX2Q6XYB7 198 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 APBA2Q99767 749 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.48□□□□□ -0.73
CRLF3-205ENST00000583805 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 DNAH12Q6ZR08 3092 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 SMCHD1A6NHR9 2005 aa10.48□□□□□ -0.73
CRLF3-205ENST00000583805 LTBP2Q14767 1821 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 GOLIM4O00461 696 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 ZKSCAN1P17029 563 aaPredicted RBP10.47□□□□□ -0.73
CRLF3-205ENST00000583805 VCAM1P19320 739 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 SHMT1P34896 483 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 JAG1P78504 1218 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 GABPAQ06546 454 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 MAP3K21Q5TCX8 1036 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 GPR142Q7Z601 462 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 TRIB2Q92519 343 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 DNAJC2Q99543 621 aaKnown RBP10.47□□□□□ -0.73
CRLF3-205ENST00000583805 SH2D4AQ9H788 454 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
CRLF3-205ENST00000583805 PAG1Q9NWQ8 432 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 RBPJLQ9UBG7 517 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
CRLF3-205ENST00000583805 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 ATP5JP18859 108 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 CYP2B6P20813 491 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 PLCD1P51178 756 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 SHROOM1Q2M3G4 852 aaPredicted RBP10.46□□□□□ -0.73
CRLF3-205ENST00000583805 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 CATSPERGQ6ZRH7 1159 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 TMEM179Q6ZVK1 233 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 PLEKHH3Q7Z736 793 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 PAGR1Q9BTK6 254 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 DCP1AQ9NPI6 582 aaPredicted RBP10.46□□□□□ -0.73
CRLF3-205ENST00000583805 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
CRLF3-205ENST00000583805 MCM3APO60318 1980 aa10.46□□□□□ -0.74
CRLF3-205ENST00000583805 RANBP2P49792 3224 aaKnown RBP10.46□□□□□ -0.74
CRLF3-205ENST00000583805 ADD2P35612 726 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 MORN1Q5T089 497 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 LPAR1Q92633 364 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 USP6NLQ92738 828 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 PAWRQ96IZ0 340 aaKnown RBP10.45□□□□□ -0.74
CRLF3-205ENST00000583805 HAUS7Q99871 368 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 PLSCR2Q9NRY7 297 aa10.45□□□□□ -0.74
CRLF3-205ENST00000583805 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
CRLF3-205ENST00000583805 MSCO60682 206 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 UBE3CQ15386 1083 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
CRLF3-205ENST00000583805 Q3C1V9 767 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 SIRT2Q8IXJ6 389 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 LCORLQ8N3X6 602 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 SDR42E1Q8WUS8 393 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 GPATCH3Q96I76 525 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 CCDC17Q96LX7 622 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 PORCNQ9H237 461 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 PRO3102Q9H379 93 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 C11orf49Q9H6J7 331 aa10.44□□□□□ -0.74
CRLF3-205ENST00000583805 RPAP3Q9H6T3 665 aaPredicted RBP10.44□□□□□ -0.74
CRLF3-205ENST00000583805 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
CRLF3-205ENST00000583805 HOXC6P09630 235 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 FOSBP53539 338 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 GRB14Q14449 540 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 COG2Q14746 738 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 SEPT2Q15019 361 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 MFSD14CQ5VZR4 134 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 NLRP7Q8WX94 980 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 EDC3Q96F86 508 aaKnown RBP10.43□□□□□ -0.74
CRLF3-205ENST00000583805 BOLA2Q9H3K6 86 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 HOXC10Q9NYD6 342 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 MYH6P13533 1939 aa10.43□□□□□ -0.74
CRLF3-205ENST00000583805 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms