RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 COBLO75128 1261 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 MRPS5P82675 430 aaKnown RBP9.32□□□□□ -0.92
CCDC47-205ENST00000582331 COG2Q14746 738 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-205ENST00000582331 FAM47AQ5JRC9 791 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 AKNAD1Q5T1N1 836 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 TATDN1Q6P1N9 297 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 ADGRA1Q86SQ6 560 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 RNF180Q86T96 592 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 SHCBP1Q8NEM2 672 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 UHRF1Q96T88 793 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-205ENST00000582331 MEIS3Q99687 375 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
CCDC47-205ENST00000582331 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 TTC28Q96AY4 2481 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 E9PSI1 815 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 CENPBP07199 599 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-205ENST00000582331 RARBP10826 455 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 ERCC3P19447 782 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 USP5P45974 858 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 DYNLL1P63167 89 aaKnown RBP9.31□□□□□ -0.92
CCDC47-205ENST00000582331 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 SLC44A5Q8NCS7 719 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 SPATC1LQ9H0A9 340 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 PRDM12Q9H4Q4 367 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 MROH8Q9H579 483 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 XPNPEP3Q9NQH7 507 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 SERPINB13Q9UIV8 391 aa9.31□□□□□ -0.92
CCDC47-205ENST00000582331 A0A1W2PQ45 241 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 A0A1W2PQY0 241 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 DCDC2CA8MYV0 355 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 IGSF3O75054 1194 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 PGK1P00558 417 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 CYP2E1P05181 493 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 GNAI3P08754 354 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 MTX1Q13505 466 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 CCDC85BQ15834 202 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 CCDC158Q5M9N0 1113 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 TTC39AQ5SRH9 613 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 CCDC174Q6PII3 467 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 TTC6Q86TZ1 520 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 NCAPG2Q86XI2 1143 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 ABRAQ8N0Z2 381 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 MAML3Q96JK9 1138 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 TOX2Q96NM4 488 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.3□□□□□ -0.922e-7■■□□□ 12.4
CCDC47-205ENST00000582331 API5Q9BZZ5 524 aaKnown RBP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 EHD4Q9H223 541 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
CCDC47-205ENST00000582331 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
CCDC47-205ENST00000582331 ZNF236Q9UL36 1845 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 GRXCR1A8MXD5 290 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 TIMP1P01033 207 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 FCER1AP12319 257 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 CYP7A1P22680 504 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 IGFBP4P22692 258 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 PBX2P40425 430 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 PLS1Q14651 629 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 ANKRD33Q7Z3H0 272 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 CERS3Q8IU89 383 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 MB21D1Q8N884 522 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
CCDC47-205ENST00000582331 C1QTNF1Q9BXJ1 281 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 PBX4Q9BYU1 374 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 TANGO6Q9C0B7 1094 aa9.29□□□□□ -0.92
CCDC47-205ENST00000582331 FOCADQ5VW36 1801 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 ANP32CO43423 234 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 GUCY1A2P33402 732 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 SLFN5Q08AF3 891 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 PPIGQ13427 754 aaKnown RBP eCLIP9.28□□□□□ -0.921e-10■■□□□ 11.6
CCDC47-205ENST00000582331 ADGRE1Q14246 886 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 SEPT2Q15019 361 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
CCDC47-205ENST00000582331 TMEM240Q5SV17 173 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 MFSD5Q6N075 450 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 MIGA1Q8NAN2 632 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 NUP133Q8WUM0 1156 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 TINF2Q9BSI4 451 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 KRTAP3-2Q9BYR7 98 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 PIH1D3Q9NQM4 214 aaKnown RBP9.28□□□□□ -0.92
CCDC47-205ENST00000582331 STARD7Q9NQZ5 370 aa9.28□□□□□ -0.92
CCDC47-205ENST00000582331 A0A1W2PRG0 241 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
CCDC47-205ENST00000582331 SLC25A27O95847 323 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 AKR1A1P14550 325 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 SHMT1P34896 483 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 ZAP70P43403 619 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 PLCD1P51178 756 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 ACLYP53396 1101 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms