RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 MMP19Q99542 508 aa17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 ATP11BQ9Y2G3 1177 aa17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 DIS3Q9Y2L1 958 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 ZNF236Q9UL36 1845 aa17.46■□□□□ 0.39
CDC42EP4-208ENST00000582303 DLL1O00548 723 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 RAD21O60216 631 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 STAT3P40763 770 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 TMEM132BQ14DG7 1078 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 KIAA1755Q5JYT7 1200 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 C1orf53Q5VUE5 145 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 FAM109BQ6ICB4 259 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 CTR9Q6PD62 1173 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 SLC39A5Q6ZMH5 540 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 RNF180Q86T96 592 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 MKNK2Q9HBH9 465 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 MTMR10Q9NXD2 777 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
CDC42EP4-208ENST00000582303 VWA5AO00534 786 aa17.44■□□□□ 0.38
CDC42EP4-208ENST00000582303 ZFYP08048 801 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-208ENST00000582303 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
CDC42EP4-208ENST00000582303 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
CDC42EP4-208ENST00000582303 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-208ENST00000582303 CYP2D7A0A087X1C5 515 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 GNAT2P19087 354 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 SBK1Q52WX2 424 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 Q7L0L9 218 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 TEX13BQ9BXU2 312 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 XPNPEP3Q9NQH7 507 aa17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 PRDM5Q9NQX1 630 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-208ENST00000582303 ADCYAP1R1P41586 468 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 SNX17Q15036 470 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 LRRC41Q15345 812 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 ANO1Q5XXA6 986 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
CDC42EP4-208ENST00000582303 AKR1A1P14550 325 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 FAM83BQ5T0W9 1011 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 APPBP2Q92624 585 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 TACC3Q9Y6A5 838 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 A0A0G2JMZ2 1700 aa17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 LAMA2P24043 3122 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-208ENST00000582303 ROBO3Q96MS0 1386 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 POTEB2H3BUK9 544 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 ZNF697Q5TEC3 545 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 FBXO28Q9NVF7 368 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 PHF24Q9UPV7 400 aa17.4■□□□□ 0.38
CDC42EP4-208ENST00000582303 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 F5H6K3 240 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 ZBED4O75132 1171 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 PGK2P07205 417 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 TDO2P48775 406 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 KLRC3Q07444 240 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 FERMT2Q96AC1 680 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
CDC42EP4-208ENST00000582303 GSG1L2A8MUP6 293 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 ATP2A1O14983 1001 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 APPP05067 770 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 FDX1P10109 184 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 RASA1P20936 1047 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 TSEN34Q9BSV6 310 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
CDC42EP4-208ENST00000582303 ERC2O15083 957 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 CLTBP09497 229 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 PDE4BQ07343 736 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 REPS2Q8NFH8 660 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 BADQ92934 168 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
CDC42EP4-208ENST00000582303 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms