RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TRIM32Q13049 653 aa19.71■□□□□ 0.75
SREBF1-219ENST00000580540 MORN1Q5T089 497 aa19.71■□□□□ 0.75
SREBF1-219ENST00000580540 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
SREBF1-219ENST00000580540 NKX2-3Q8TAU0 364 aa19.71■□□□□ 0.75
SREBF1-219ENST00000580540 TACC3Q9Y6A5 838 aa19.71■□□□□ 0.75
SREBF1-219ENST00000580540 GREB1LQ9C091 1923 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-219ENST00000580540 RBBP6Q7Z6E9 1792 aaKnown RBP19.7■□□□□ 0.74
SREBF1-219ENST00000580540 ZKSCAN1P17029 563 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-219ENST00000580540 ERCC3P19447 782 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 PTPREP23469 700 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 MAP2K5Q13163 448 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 TRIB2Q92519 343 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 MKL1Q969V6 931 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 DEFB118Q96PH6 123 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 PPP1R9AQ9ULJ8 1098 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 STX8Q9UNK0 236 aa19.7■□□□□ 0.74
SREBF1-219ENST00000580540 SLC15A5A6NIM6 579 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 NMT2O60551 498 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 XRCC5P13010 732 aaKnown RBP19.69■□□□□ 0.74
SREBF1-219ENST00000580540 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
SREBF1-219ENST00000580540 TMEM132BQ14DG7 1078 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 CCL14Q16627 93 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 SLFN13Q68D06 897 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 U2AF1L4Q8WU68 220 aaKnown RBP19.69■□□□□ 0.74
SREBF1-219ENST00000580540 USP6NLQ92738 828 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 SLF1Q9BQI6 1058 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 MTMR7Q9Y216 660 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 PLXNB2O15031 1838 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 PLIN4Q96Q06 1357 aa19.69■□□□□ 0.74
SREBF1-219ENST00000580540 MYH4Q9Y623 1939 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 ORC4O43929 436 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
SREBF1-219ENST00000580540 GJA8P48165 433 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 SLC4A3P48751 1232 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 TRMT44Q8IYL2 757 aaKnown RBP19.68■□□□□ 0.74
SREBF1-219ENST00000580540 SHISA4Q96DD7 197 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 APBA2Q99767 749 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.74
SREBF1-219ENST00000580540 HMX1Q9NP08 348 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-219ENST00000580540 CTDP1Q9Y5B0 961 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-219ENST00000580540 RLFQ13129 1914 aa19.68■□□□□ 0.74
SREBF1-219ENST00000580540 VWA5AO00534 786 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 SGPL1O95470 568 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 PRKAR2AP13861 404 aaKnown RBP19.67■□□□□ 0.74
SREBF1-219ENST00000580540 PPP4R3BQ5MIZ7 849 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 MFSD6Q6ZSS7 791 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 DPP9Q86TI2 863 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 SHCBP1Q8NEM2 672 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 KIFC2Q96AC6 838 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 MROH8Q9H579 483 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 IL17RBQ9NRM6 502 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 PDE4DIPQ5VU43 2346 aa19.67■□□□□ 0.74
SREBF1-219ENST00000580540 ZNF213O14771 459 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 BMP3P12645 472 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 STAT3P40763 770 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 GRB14Q14449 540 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 AKNAD1Q5T1N1 836 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 PRPF38AQ8NAV1 312 aaKnown RBP19.66■□□□□ 0.74
SREBF1-219ENST00000580540 GMCL1P1Q8NEA9 526 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 ADAMTS5Q9UNA0 930 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 RPTORQ8N122 1335 aa19.66■□□□□ 0.74
SREBF1-219ENST00000580540 TNRC18O15417 2968 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-219ENST00000580540 STRNO43815 780 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 ZBED4O75132 1171 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 SLC25A27O95847 323 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 FGRP09769 529 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 MCCP23508 829 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 ADORA2AP29274 412 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 IKQ13123 557 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-219ENST00000580540 TBC1D10CQ8IV04 446 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 NPLOC4Q8TAT6 608 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 RNF41Q9H4P4 317 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-219ENST00000580540 PAK6Q9NQU5 681 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-219ENST00000580540 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 SYNPO2Q9UMS6 1093 aa19.65■□□□□ 0.74
SREBF1-219ENST00000580540 TMEM232C9JQI7 657 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 SLC1A4P43007 532 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 CACNB2Q08289 660 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-219ENST00000580540 MFSD14CQ5VZR4 134 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 RIOX2Q8IUF8 465 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 NBPF3Q9H094 633 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 BRCA2P51587 3418 aa19.64■□□□□ 0.73
SREBF1-219ENST00000580540 PARP14Q460N5 1801 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 A0A0G2JMZ2 1700 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 FARP2O94887 1054 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-219ENST00000580540 FCER1AP12319 257 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 SNRNP48Q6IEG0 339 aaKnown RBP19.63■□□□□ 0.73
SREBF1-219ENST00000580540 REPS2Q8NFH8 660 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 STAG1Q8WVM7 1258 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 RUFY2Q8WXA3 655 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 MMP19Q99542 508 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 DSCC1Q9BVC3 393 aa19.63■□□□□ 0.73
SREBF1-219ENST00000580540 COL11A1P12107 1806 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-219ENST00000580540 COBLO75128 1261 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 HOXC6P09630 235 aa19.62■□□□□ 0.73
SREBF1-219ENST00000580540 IMMTQ16891 758 aaKnown RBP19.62■□□□□ 0.73
SREBF1-219ENST00000580540 KCTD1Q719H9 257 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms