RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GADL1Q6ZQY3 521 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 FASTKD5Q7L8L6 764 aaKnown RBP18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 SNX21Q969T3 373 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 CHMP4CQ96CF2 233 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 NUP88Q99567 741 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 RLFQ13129 1914 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 TESPA1A2RU30 521 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 PALM3A6NDB9 673 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 HSPA6P17066 643 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 METAP2P50579 478 aaKnown RBP eCLIP18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 ZNF543Q08ER8 600 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 FAM83BQ5T0W9 1011 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 KCTD1Q719H9 257 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 CTCFLQ8NI51 663 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
CSNK1D-212ENST00000580061 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 CCL15-CCL14A0A0B4J2E2 113 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 MANSC4A6NHS7 340 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 PFKFB2O60825 505 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 GOLGA8HP0CJ92 632 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 KIF5BP33176 963 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 STK3Q13188 491 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 CCL15Q16663 113 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 RTN1Q16799 776 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 TREML2Q5T2D2 321 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 GPATCH4Q5T3I0 446 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 GPAT2Q6NUI2 795 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 BRI3BPQ8WY22 251 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 CAPNS2Q96L46 248 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 RPAP3Q9H6T3 665 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 FAM217BQ9NTX9 383 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 AGTPBP1Q9UPW5 1226 aa18.54■□□□□ 0.56
CSNK1D-212ENST00000580061 CDC27P30260 824 aa18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 SCRN1Q12765 414 aa18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 NOGQ13253 232 aa18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 GRM1Q13255 1194 aa18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 RBM28Q9NW13 759 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L15C9J2P7 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L13C9JLJ4 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L11C9JVI0 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L18D6R9N7 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L22D6RA61 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L17D6RBQ6 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L19D6RCP7 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L20D6RJB6 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 PLA2G6O60733 806 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 HOXA7P31268 230 aaPredicted RBP18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 ADD1P35611 737 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 INHBEP58166 350 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 USP17L24Q0WX57 530 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 CATSPERGQ6ZRH7 1159 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 NECAB1Q8N987 351 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 GTF3C6Q969F1 213 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 ISY1Q9ULR0 285 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-212ENST00000580061 THSD7BQ9C0I4 1608 aa18.52■□□□□ 0.55
CSNK1D-212ENST00000580061 WDR33Q9C0J8 1336 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 MYH6P13533 1939 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 CCDC196A0A1B0GTZ2 297 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 BTBD19C9JJ37 291 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 KLRF2D3W0D1 207 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 GNAQP50148 359 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 STAT2P52630 851 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 KIF23Q02241 960 aaPredicted RBP18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 ANKRD23Q86SG2 305 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 ZIC5Q96T25 663 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 PTPN18Q99952 460 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 FBXO28Q9NVF7 368 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 BAZ2BQ9UIF8 2168 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-212ENST00000580061 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 AOC2O75106 756 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 VEGFBP49765 207 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 SREBF2Q12772 1141 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 PABPC4Q13310 644 aaKnown RBP eCLIP18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 HSCBQ8IWL3 235 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 SRBD1Q8N5C6 995 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms