RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ATP6V0A2Q9Y487 856 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 MAP3K4Q9Y6R4 1608 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 ARHGAP31Q2M1Z3 1444 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 ATP2A1O14983 1001 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 CLTAP09496 248 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 KIF1BO60333 1816 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 FLOT1O75955 427 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 NNTQ13423 1086 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
PCDHGB3-201ENST00000576222 RGS16O15492 202 aaPredicted RBP14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 E2F5Q15329 346 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 LRCH2Q5VUJ6 765 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 DENND2CQ68D51 928 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 GSTA5Q7RTV2 222 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 FUCA2Q9BTY2 467 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 IQCGQ9H095 443 aaKnown RBP14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 ADCY10Q96PN6 1610 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 PDE6AP16499 860 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 FNBP4Q8N3X1 1017 aaPredicted RBP14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 LPIN2Q92539 896 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 EPB41L5Q9HCM4 733 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 GPR108Q9NPR9 543 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 ADGRG1Q9Y653 693 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 IQSEC2Q5JU85 1478 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 LAMC1P11047 1609 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 M0R2C6 588 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 HEXIM1O94992 359 aaKnown RBP14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 GSTO1P78417 241 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 TSNAXIP1Q2TAA8 658 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 ALS2CLQ60I27 953 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 MADDQ8WXG6 1647 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 B4DLN1 442 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 AP5Z1O43299 807 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 KCNA6P17658 529 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 SPATA5Q8NB90 893 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 OSBP2Q969R2 916 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
PCDHGB3-201ENST00000576222 TNFAIP3P21580 790 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 SYCE1Q8N0S2 351 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 SMC6Q96SB8 1091 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 STK38LQ9Y2H1 464 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 TBX22Q9Y458 520 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 RPSAP08865 295 aaKnown RBP14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 NONOQ15233 471 aaKnown RBP eCLIP14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 TBC1D31Q96DN5 1066 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 KRT12Q99456 494 aa14.52□□□□□ -0.08
PCDHGB3-201ENST00000576222 PREX2Q70Z35 1606 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 KRIT1O00522 736 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 NR5A1Q13285 461 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC174Q6PII3 467 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 RETREG2Q8NC44 543 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 STMN2Q93045 179 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 IL25Q9H293 177 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 LRRC7Q96NW7 1537 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 ATP10DQ9P241 1426 aa14.52□□□□□ -0.09
PCDHGB3-201ENST00000576222 FRMD3A2A2Y4 597 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 FMNL1O95466 1100 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 DESP17661 470 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 DZIP3Q86Y13 1208 aaKnown RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 DPF2Q92785 391 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 SRPRBQ9Y5M8 271 aaKnown RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 EPB41P11171 864 aaKnown RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 L2HGDHQ9H9P8 463 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 MMP1P03956 469 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 GGCXP38435 758 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 PPARAQ07869 468 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 EHHADHQ08426 723 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC63Q8NA47 563 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 SPOPO43791 374 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 ARID4AP29374 1257 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 CXCR5P32302 372 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 PEX19P40855 299 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 RASSF7Q02833 373 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 TSGA10IPQ3SY00 556 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 HERC4Q5GLZ8 1057 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 KRT25Q7Z3Z0 450 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 CDC42BPAQ5VT25 1732 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 CLTCL1P53675 1640 aa14.51□□□□□ -0.09
PCDHGB3-201ENST00000576222 TNKSO95271 1327 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 FAM13AO94988 1023 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 PLA2G4AP47712 749 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 PDCLQ13371 301 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 KRT31Q15323 416 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 CCDC38Q502W7 563 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 IFNAR1P17181 557 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 NR1D1P20393 614 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 CYP27A1Q02318 531 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 EMBQ6PCB8 327 aa14.5□□□□□ -0.09
PCDHGB3-201ENST00000576222 UBL4BQ8N7F7 174 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms