RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 ISY1Q9ULR0 285 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-216ENST00000574344 ADORA2AP29274 412 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 CCND3P30281 292 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 PDE4BQ07343 736 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 HDAC1Q13547 482 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 C11orf49Q9H6J7 331 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 SLC5A4Q9NY91 659 aa11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 COLQQ9Y215 455 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-216ENST00000574344 MCM3APO60318 1980 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 STRNO43815 780 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 PDE1AP54750 535 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 NPLOC4Q8TAT6 608 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 NUP88Q99567 741 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 MROH8Q9H579 483 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 FLRT1Q9NZU1 646 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 CLIP2Q9UDT6 1046 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 OGDHLQ9ULD0 1010 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 SALL3Q9BXA9 1300 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 LAMA4Q16363 1823 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
NPLOC4-216ENST00000574344 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 SLC25A27O95847 323 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 HOXC6P09630 235 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 FCER1AP12319 257 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 CYP2C19P33261 490 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 PPARAQ07869 468 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
NPLOC4-216ENST00000574344 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 F5H6K3 240 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 VWA5AO00534 786 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 TTLL1O95922 423 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 NDUFB10O96000 172 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 KLRC3Q07444 240 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 CEP95Q96GE4 821 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 MMP19Q99542 508 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
NPLOC4-216ENST00000574344 TSPY2A6NKD2 308 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 MSCO60682 206 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 COPB2P35606 906 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 STAT3P40763 770 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 TFAP4Q01664 338 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 CTDSPL2Q05D32 466 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 KCTD2Q14681 263 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 RIOX2Q8IUF8 465 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 RBM19Q9Y4C8 960 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-216ENST00000574344 PFASO15067 1338 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 A0A0D9SFI3 127 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 RANBP6O60518 1105 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 COBLO75128 1261 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 ZBED4O75132 1171 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 PGK2P07205 417 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 CYBAP13498 195 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 LHX8Q68G74 356 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 CPXCR1Q8N123 301 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms