RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FLT1P17948 1338 aa11.34□□□□□ -0.59
NPLOC4-210ENST00000572824 COL2A1P02458 1487 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 IPO8O15397 1037 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 GDF11O95390 407 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 HMGCS2P54868 508 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 OS9Q13438 667 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 TTC39AQ5SRH9 613 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 CEP85Q6P2H3 762 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 PARK7Q99497 189 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 BCL11AQ9H165 835 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 LRP2BPQ9P2M1 347 aa11.33□□□□□ -0.6
NPLOC4-210ENST00000572824 CXCL11O14625 94 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 CHGBP05060 677 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 SPP2Q13103 211 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 SLFNL1Q499Z3 407 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 ANKRD13CQ8N6S4 541 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 MYH7P12883 1935 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 MYH8P13535 1937 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 FRMPD3Q5JV73 1810 aa11.32□□□□□ -0.6
NPLOC4-210ENST00000572824 CTNND1O60716 968 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 TRIM32Q13049 653 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 KIF22Q14807 665 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 NAA16Q6N069 864 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 PDXDC2PQ6P474 469 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 RAET1EQ8TD07 263 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 BAP1Q92560 729 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 EDC3Q96F86 508 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
NPLOC4-210ENST00000572824 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 ZBTB24O43167 697 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 CCL5P13501 91 aa11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 GRK4P32298 578 aa11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 FLT3LGP49771 235 aa11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-210ENST00000572824 H0YGN5 161 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 UQCRFS1P1P0C7P4 283 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 CAP2P40123 477 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 GSTO1P78417 241 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 C20orf194Q5TEA3 1177 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 RLFQ13129 1914 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
NPLOC4-210ENST00000572824 POM121CA8CG34 1229 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 ADCY3O60266 1144 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 IDH1O75874 414 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 INHAP05111 366 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 CYP7A1P22680 504 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 RPIAP49247 311 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 FCGRTP55899 365 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 UBE2Q1Q7Z7E8 422 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 AACSQ86V21 672 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 RNF208Q9H0X6 261 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 BIN2Q9UBW5 565 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
NPLOC4-210ENST00000572824 TNPO2O14787 897 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 LDHCP07864 332 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 PTK2Q05397 1052 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 NR1H3Q13133 447 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 ZYXQ15942 572 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
NPLOC4-210ENST00000572824 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 CYP2D6P10635 497 aa11.26□□□□□ -0.61
NPLOC4-210ENST00000572824 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms