RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 CD2BP2O95400 341 aaKnown RBP16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 TROAPQ12815 778 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 IKQ13123 557 aaPredicted RBP16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
KLHDC4-222ENST00000568444 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 KIF5BP33176 963 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 MCM2P49736 904 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 CCT2P78371 535 aaKnown RBP16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 GRM4Q14833 912 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 RTN1Q16799 776 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
KLHDC4-222ENST00000568444 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 AOC2O75106 756 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 LARGE1O95461 756 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 RCAN1P53805 252 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 EVCP57679 992 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 NOGQ13253 232 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 ME3Q16798 604 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 GPATCH4Q5T3I0 446 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 FANCBQ8NB91 859 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 MAP3K14Q99558 947 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 MAD2L2Q9UI95 211 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 STAT2P52630 851 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 MOGSQ13724 837 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
KLHDC4-222ENST00000568444 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 PFKFB2O60825 505 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 FLOT1O75955 427 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 VEGFBP49765 207 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 FEM1BQ9UK73 627 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 NID2Q14112 1375 aa16.61■□□□□ 0.25
KLHDC4-222ENST00000568444 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 PDHXO00330 501 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CPLX1O14810 134 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 OSBPP22059 807 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CDC27P30260 824 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 SLC16A2P36021 539 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 GNAQP50148 359 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 INHBEP58166 350 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 SCRN1Q12765 414 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 GPAT2Q6NUI2 795 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 SNX21Q969T3 373 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 KIFC2Q96AC6 838 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 UBA5Q9GZZ9 404 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 FBXO28Q9NVF7 368 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
KLHDC4-222ENST00000568444 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms