RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 LRRC47Q8N1G4 583 aaKnown RBP20.29■□□□□ 0.84
KNOP1-205ENST00000568230 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
KNOP1-205ENST00000568230 NBPF3Q9H094 633 aa20.29■□□□□ 0.84
KNOP1-205ENST00000568230 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
KNOP1-205ENST00000568230 PPP1R9AQ9ULJ8 1098 aa20.29■□□□□ 0.84
KNOP1-205ENST00000568230 ADAMTS5Q9UNA0 930 aa20.29■□□□□ 0.84
KNOP1-205ENST00000568230 COL11A1P12107 1806 aaPredicted RBP20.29■□□□□ 0.84
KNOP1-205ENST00000568230 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
KNOP1-205ENST00000568230 RAD21O60216 631 aa20.28■□□□□ 0.84
KNOP1-205ENST00000568230 HMGCRP04035 888 aa20.28■□□□□ 0.84
KNOP1-205ENST00000568230 PCP11498 1178 aaKnown RBP20.28■□□□□ 0.84
KNOP1-205ENST00000568230 EN2P19622 333 aaPredicted RBP20.28■□□□□ 0.84
KNOP1-205ENST00000568230 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
KNOP1-205ENST00000568230 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
KNOP1-205ENST00000568230 MOV10L1Q9BXT6 1211 aaKnown RBP20.28■□□□□ 0.84
KNOP1-205ENST00000568230 IL17RBQ9NRM6 502 aa20.28■□□□□ 0.84
KNOP1-205ENST00000568230 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
KNOP1-205ENST00000568230 HAND2P61296 217 aa20.27■□□□□ 0.84
KNOP1-205ENST00000568230 SHCBP1Q8NEM2 672 aa20.27■□□□□ 0.84
KNOP1-205ENST00000568230 DSCC1Q9BVC3 393 aa20.27■□□□□ 0.84
KNOP1-205ENST00000568230 IL25Q9H293 177 aa20.27■□□□□ 0.84
KNOP1-205ENST00000568230 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
KNOP1-205ENST00000568230 RAD50Q92878 1312 aa20.27■□□□□ 0.84
KNOP1-205ENST00000568230 GJB1P08034 283 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 CYP2B6P20813 491 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 PTPREP23469 700 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 RGS2P41220 211 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 NOVP48745 357 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 GRB14Q14449 540 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 CENPQQ7L2Z9 268 aaPredicted RBP20.27■□□□□ 0.83
KNOP1-205ENST00000568230 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 STAG1Q8WVM7 1258 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 TRIB2Q92519 343 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 APBA2Q99767 749 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 SLF1Q9BQI6 1058 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 UNC93B1Q9H1C4 597 aa20.27■□□□□ 0.83
KNOP1-205ENST00000568230 SLC15A5A6NIM6 579 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 VWA5AO00534 786 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 NMT2O60551 498 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 MAP2K5Q13163 448 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 TMEM132BQ14DG7 1078 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 AKNAD1Q5T1N1 836 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 WDR78Q5VTH9 848 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 REPS2Q8NFH8 660 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 SHISA4Q96DD7 197 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 RNF208Q9H0X6 261 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 STX8Q9UNK0 236 aa20.26■□□□□ 0.83
KNOP1-205ENST00000568230 HOXC6P09630 235 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 ERCC3P19447 782 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 SLFN13Q68D06 897 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
KNOP1-205ENST00000568230 TRMT44Q8IYL2 757 aaKnown RBP20.25■□□□□ 0.83
KNOP1-205ENST00000568230 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 GMCL1Q96IK5 515 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
KNOP1-205ENST00000568230 MROH8Q9H579 483 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 PAK6Q9NQU5 681 aaPredicted RBP20.25■□□□□ 0.83
KNOP1-205ENST00000568230 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 ZNF214Q9UL59 606 aaPredicted RBP20.25■□□□□ 0.83
KNOP1-205ENST00000568230 IVNS1ABPQ9Y6Y0 642 aa20.25■□□□□ 0.83
KNOP1-205ENST00000568230 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
KNOP1-205ENST00000568230 CHMLP26374 656 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 GJA8P48165 433 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 PLS1Q14651 629 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 RRP12Q5JTH9 1297 aaKnown RBP20.24■□□□□ 0.83
KNOP1-205ENST00000568230 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
KNOP1-205ENST00000568230 NEDD4P46934 1319 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 ZNF213O14771 459 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 NT5C2P49902 561 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 TRIM32Q13049 653 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 RIOX2Q8IUF8 465 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 PRPF38AQ8NAV1 312 aaKnown RBP20.23■□□□□ 0.83
KNOP1-205ENST00000568230 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
KNOP1-205ENST00000568230 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
KNOP1-205ENST00000568230 CEP290O15078 2479 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 STRNO43815 780 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 SLC25A27O95847 323 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 BMP3P12645 472 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 CCL14Q16627 93 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 NCAPG2Q86XI2 1143 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 RUFY2Q8WXA3 655 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.22■□□□□ 0.835e-7■■■■■ 39.7
KNOP1-205ENST00000568230 CTNNA3Q9UI47 895 aa20.22■□□□□ 0.83
KNOP1-205ENST00000568230 ADORA2AP29274 412 aa20.21■□□□□ 0.83
KNOP1-205ENST00000568230 COPB2P35606 906 aa20.21■□□□□ 0.83
KNOP1-205ENST00000568230 STAT3P40763 770 aa20.21■□□□□ 0.83
KNOP1-205ENST00000568230 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
KNOP1-205ENST00000568230 TEX13BQ9BXU2 312 aa20.21■□□□□ 0.83
KNOP1-205ENST00000568230 RPTORQ8N122 1335 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 SGPL1O95470 568 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
KNOP1-205ENST00000568230 SLC1A4P43007 532 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 ESR2Q92731 530 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 DEFB118Q96PH6 123 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
KNOP1-205ENST00000568230 SGSM2O43147 1006 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms