RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
RNF40-208ENST00000565995 FLOT1O75955 427 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 RARBP10826 455 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 PDE6AP16499 860 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 EPHB4P54760 987 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 TMEM132BQ14DG7 1078 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 ZNF792Q3KQV3 632 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 SLC9C2Q5TAH2 1124 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 ANKRD33Q7Z3H0 272 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 RNF180Q86T96 592 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 NCAPG2Q86XI2 1143 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 ATG4CQ96DT6 458 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 TINF2Q9BSI4 451 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 SH2D4AQ9H788 454 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 XPNPEP3Q9NQH7 507 aa15.45■□□□□ 0.06
RNF40-208ENST00000565995 MPHOSPH10O00566 681 aaKnown RBP15.44■□□□□ 0.06
RNF40-208ENST00000565995 ZNF865P0CJ78 1059 aaPredicted RBP15.44■□□□□ 0.06
RNF40-208ENST00000565995 FOSL2P15408 326 aa15.44■□□□□ 0.06
RNF40-208ENST00000565995 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
RNF40-208ENST00000565995 CHD7Q9P2D1 2997 aa15.44■□□□□ 0.06
RNF40-208ENST00000565995 ZNF532Q9HCE3 1301 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.43■□□□□ 0.06
RNF40-208ENST00000565995 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.43■□□□□ 0.06
RNF40-208ENST00000565995 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
RNF40-208ENST00000565995 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 ADAMTS4O75173 837 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 PLS1Q14651 629 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 CEP85Q6P2H3 762 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 AACSQ86V21 672 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 MSL3Q8N5Y2 521 aaKnown RBP15.43■□□□□ 0.06
RNF40-208ENST00000565995 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 RNPC3Q96LT9 517 aaKnown RBP15.43■□□□□ 0.06
RNF40-208ENST00000565995 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
RNF40-208ENST00000565995 AKR1B1P15121 316 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 RAG1P15918 1043 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 COPB2P35606 906 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 FPGSQ05932 587 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 FAAP100Q0VG06 881 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 C12orf60Q5U649 245 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
RNF40-208ENST00000565995 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 KLHDC9Q8NEP7 349 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 MMP19Q99542 508 aa15.42■□□□□ 0.06
RNF40-208ENST00000565995 ZNF214Q9UL59 606 aaPredicted RBP15.42■□□□□ 0.06
RNF40-208ENST00000565995 VWA5AO00534 786 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 PGK1P00558 417 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
RNF40-208ENST00000565995 CYP2D6P10635 497 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 RLBP1P12271 317 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 AKR1A1P14550 325 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 TAL1P17542 331 aaPredicted RBP15.41■□□□□ 0.06
RNF40-208ENST00000565995 ICA1Q05084 483 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 SPICE1Q8N0Z3 855 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 DYNLL2Q96FJ2 89 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
RNF40-208ENST00000565995 MOXD2PA6NHM9 499 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 TIMP1P01033 207 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 PGK2P07205 417 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 STAT3P40763 770 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 CDK8P49336 464 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 CDK7P50613 346 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 ACLYP53396 1101 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 KCTD2Q14681 263 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 TJAP1Q5JTD0 557 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 RASIP1Q5U651 963 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 C16orf86Q6ZW13 317 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.4■□□□□ 0.06
RNF40-208ENST00000565995 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 NUP133Q8WUM0 1156 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 KANSL2Q9H9L4 492 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 TMEM39AQ9NV64 488 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 PPP1R9AQ9ULJ8 1098 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
RNF40-208ENST00000565995 SYNGAP1Q96PV0 1343 aa15.4■□□□□ 0.06
RNF40-208ENST00000565995 DNAJC25-GNG10A0A024R161 153 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 DCDC2CA8MYV0 355 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
RNF40-208ENST00000565995 DNAJB2P25686 324 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
RNF40-208ENST00000565995 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
RNF40-208ENST00000565995 ZNF576Q9H609 170 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 FBXO28Q9NVF7 368 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 TBX21Q9UL17 535 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 ELP1O95163 1332 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
RNF40-208ENST00000565995 GOLIM4O00461 696 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 PQBP1O60828 265 aaKnown RBP15.38■□□□□ 0.05
RNF40-208ENST00000565995 DUSP11O75319 330 aaKnown RBP15.38■□□□□ 0.05
RNF40-208ENST00000565995 SNAI1O95863 264 aaPredicted RBP15.38■□□□□ 0.05
RNF40-208ENST00000565995 ADD2P35612 726 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms