RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 HDAC8Q9BY41 377 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 PRDM14Q9GZV8 571 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 MKRN2Q9H000 416 aaKnown RBP8.08□□□□□ -1.12
UBR1-205ENST00000564540 ASCC2Q9H1I8 757 aaPredicted RBP8.08□□□□□ -1.12
UBR1-205ENST00000564540 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 C9IYK1 514 aa8.07□□□□□ -1.12
UBR1-205ENST00000564540 ERVFC1P60507 584 aa8.07□□□□□ -1.12
UBR1-205ENST00000564540 ZSWIM9Q86XI8 627 aa8.07□□□□□ -1.12
UBR1-205ENST00000564540 RBBP8NLQ8NC74 664 aaPredicted RBP8.07□□□□□ -1.12
UBR1-205ENST00000564540 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
UBR1-205ENST00000564540 PRAMEF1O95521 474 aa8.06□□□□□ -1.12
UBR1-205ENST00000564540 AFMP43652 599 aa8.06□□□□□ -1.12
UBR1-205ENST00000564540 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 COL9A2Q14055 689 aaPredicted RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 FBLN7Q53RD9 439 aa8.06□□□□□ -1.12
UBR1-205ENST00000564540 TDRD10Q5VZ19 366 aaKnown RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 ENOX1Q8TC92 643 aaKnown RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 SYTL5Q8TDW5 730 aaPredicted RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 SPATA32Q96LK8 384 aa8.06□□□□□ -1.12
UBR1-205ENST00000564540 SUCOQ9UBS9 1254 aaKnown RBP8.06□□□□□ -1.12
UBR1-205ENST00000564540 GUCY2CP25092 1073 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
UBR1-205ENST00000564540 TEKQ02763 1124 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 KCNMB1Q16558 191 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 TAB3Q8N5C8 712 aaPredicted RBP8.05□□□□□ -1.12
UBR1-205ENST00000564540 TCTN2Q96GX1 697 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 KIRREL1Q96J84 757 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 CCSER2Q9H7U1 834 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 FAM86C1Q9NVL1 165 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 INPP5FQ9Y2H2 1132 aa8.05□□□□□ -1.12
UBR1-205ENST00000564540 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 ZGLP1P0C6A0 271 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 TCF3P15923 654 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 AUHQ13825 339 aaKnown RBP8.04□□□□□ -1.12
UBR1-205ENST00000564540 USHBP1Q8N6Y0 703 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 DAGLBQ8NCG7 672 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 CCDC120Q96HB5 630 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 DHRS1Q96LJ7 313 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 FOXP3Q9BZS1 431 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 EBF1Q9UH73 591 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 FBXL21Q9UKT6 434 aa8.04□□□□□ -1.12
UBR1-205ENST00000564540 MEIS1O00470 390 aa8.03□□□□□ -1.12
UBR1-205ENST00000564540 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
UBR1-205ENST00000564540 ERCC5P28715 1186 aaPredicted RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 TRHRP34981 398 aaPredicted RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 PMS1P54277 932 aaKnown RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 EIF6P56537 245 aaKnown RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 SPOCD1Q6ZMY3 1216 aa8.03□□□□□ -1.12
UBR1-205ENST00000564540 ZNF655Q8N720 491 aaPredicted RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 LIN37Q96GY3 246 aaPredicted RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
UBR1-205ENST00000564540 GFOD1Q9NXC2 390 aa8.03□□□□□ -1.12
UBR1-205ENST00000564540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBR1-205ENST00000564540 PCDHB12Q9Y5F1 795 aa8.03□□□□□ -1.12
UBR1-205ENST00000564540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.02□□□□□ -1.13
UBR1-205ENST00000564540 SHOXO15266 292 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 TP53P04637 393 aaPredicted RBP8.02□□□□□ -1.13
UBR1-205ENST00000564540 GIPRP48546 466 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 AXDND1Q5T1B0 1012 aaPredicted RBP8.02□□□□□ -1.13
UBR1-205ENST00000564540 DCAF15Q66K64 600 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 C19orf44Q9H6X5 657 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 CHST7Q9NS84 486 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 TCFL5Q9UL49 500 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 LTBP3Q9NS15 1303 aa8.02□□□□□ -1.13
UBR1-205ENST00000564540 FKTNO75072 461 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 HPXP02790 462 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 RAC2P15153 192 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 RPL10P27635 214 aaKnown RBP8.01□□□□□ -1.13
UBR1-205ENST00000564540 RNF111Q6ZNA4 994 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 MYLIPQ8WY64 445 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 SHDQ96IW2 340 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 SP110Q9HB58 689 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 ZNF281Q9Y2X9 895 aa8.01□□□□□ -1.13
UBR1-205ENST00000564540 GLI1P08151 1106 aa8□□□□□ -1.13
UBR1-205ENST00000564540 SYPP08247 313 aa8□□□□□ -1.13
UBR1-205ENST00000564540 CTSKP43235 329 aa8□□□□□ -1.13
UBR1-205ENST00000564540 PCBP3P57721 371 aaKnown RBP8□□□□□ -1.13
UBR1-205ENST00000564540 BBS9Q3SYG4 887 aa8□□□□□ -1.13
UBR1-205ENST00000564540 TIGD5Q53EQ6 642 aa8□□□□□ -1.13
UBR1-205ENST00000564540 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
UBR1-205ENST00000564540 ZPBP2Q6X784 338 aa8□□□□□ -1.13
UBR1-205ENST00000564540 C7orf61Q8IZ16 206 aa8□□□□□ -1.13
UBR1-205ENST00000564540 PDZD8Q8NEN9 1154 aa8□□□□□ -1.13
UBR1-205ENST00000564540 ABHD4Q8TB40 342 aa8□□□□□ -1.13
UBR1-205ENST00000564540 SEC16BQ96JE7 1060 aa8□□□□□ -1.13
UBR1-205ENST00000564540 ZNF214Q9UL59 606 aaPredicted RBP8□□□□□ -1.13
UBR1-205ENST00000564540 TMEM82A0PJX8 343 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 DBX1A6NMT0 343 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 WAPLQ7Z5K2 1190 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 FAM169BQ8N8A8 192 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 LINC00116Q8NCU8 138 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 CPLX3Q8WVH0 158 aa7.99□□□□□ -1.13
UBR1-205ENST00000564540 DHX38Q92620 1227 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms