RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 NKX2-3Q8TAU0 364 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 DSCC1Q9BVC3 393 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 SPATC1LQ9H0A9 340 aa23.51■■□□□ 1.35
CMTM3-207ENST00000564060 NDUFB10O96000 172 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 MYCP01106 439 aaPredicted RBP23.5■■□□□ 1.35
CMTM3-207ENST00000564060 HMGCRP04035 888 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 INHAP05111 366 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 XRCC5P13010 732 aaKnown RBP23.5■■□□□ 1.35
CMTM3-207ENST00000564060 ELNP15502 786 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 RGS2P41220 211 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 SHCBP1Q8NEM2 672 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 ATG4CQ96DT6 458 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 PPP1R9AQ9ULJ8 1098 aa23.5■■□□□ 1.35
CMTM3-207ENST00000564060 ZNFX1Q9P2E3 1918 aaKnown RBP23.49■■□□□ 1.35
CMTM3-207ENST00000564060 ZNF213O14771 459 aa23.49■■□□□ 1.35
CMTM3-207ENST00000564060 CCL5P13501 91 aa23.49■■□□□ 1.35
CMTM3-207ENST00000564060 MFSD6Q6ZSS7 791 aa23.49■■□□□ 1.35
CMTM3-207ENST00000564060 CTNNA3Q9UI47 895 aa23.49■■□□□ 1.35
CMTM3-207ENST00000564060 STX8Q9UNK0 236 aa23.49■■□□□ 1.35
CMTM3-207ENST00000564060 SLC15A5A6NIM6 579 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 CAPN2P17655 700 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 CYP2B6P20813 491 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 HAND2P61296 217 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 PLS1Q14651 629 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 MTFR1Q15390 333 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 RRP12Q5JTH9 1297 aaKnown RBP23.48■■□□□ 1.35
CMTM3-207ENST00000564060 MORN1Q5T089 497 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 AKNAD1Q5T1N1 836 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 SAMD1Q6SPF0 538 aaPredicted RBP23.48■■□□□ 1.35
CMTM3-207ENST00000564060 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
CMTM3-207ENST00000564060 STAG1Q8WVM7 1258 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 APBA2Q99767 749 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 SLF1Q9BQI6 1058 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 RNF208Q9H0X6 261 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 MROH8Q9H579 483 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 ADAMTS5Q9UNA0 930 aa23.48■■□□□ 1.35
CMTM3-207ENST00000564060 STRNO43815 780 aa23.47■■□□□ 1.35
CMTM3-207ENST00000564060 PTPREP23469 700 aa23.47■■□□□ 1.35
CMTM3-207ENST00000564060 COPB2P35606 906 aa23.47■■□□□ 1.35
CMTM3-207ENST00000564060 IMMTQ16891 758 aaKnown RBP23.47■■□□□ 1.35
CMTM3-207ENST00000564060 MOV10L1Q9BXT6 1211 aaKnown RBP23.47■■□□□ 1.35
CMTM3-207ENST00000564060 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
CMTM3-207ENST00000564060 SLC25A27O95847 323 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 NEFLP07196 543 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 GJB1P08034 283 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 ZKSCAN1P17029 563 aaPredicted RBP23.46■■□□□ 1.35
CMTM3-207ENST00000564060 MAP2K5Q13163 448 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 SLFN13Q68D06 897 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 PRPF38AQ8NAV1 312 aaKnown RBP23.46■■□□□ 1.35
CMTM3-207ENST00000564060 USP6NLQ92738 828 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 INCENPQ9NQS7 918 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 FEM1BQ9UK73 627 aa23.46■■□□□ 1.35
CMTM3-207ENST00000564060 VWA5AO00534 786 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 BMP3P12645 472 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 EN2P19622 333 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-207ENST00000564060 GRB14Q14449 540 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 ESR2Q92731 530 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-207ENST00000564060 IL17RBQ9NRM6 502 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 TCP11L1Q9NUJ3 509 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 CTDP1Q9Y5B0 961 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-207ENST00000564060 PLXNA1Q9UIW2 1896 aa23.45■■□□□ 1.34
CMTM3-207ENST00000564060 ERCC3P19447 782 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 CHMLP26374 656 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 TMEM132BQ14DG7 1078 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 NCAPG2Q86XI2 1143 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 GMCL1Q96IK5 515 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 UNC93B1Q9H1C4 597 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 SLC5A4Q9NY91 659 aa23.44■■□□□ 1.34
CMTM3-207ENST00000564060 RPTORQ8N122 1335 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 FDX1P10109 184 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 SLC1A4P43007 532 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 GJA8P48165 433 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 NOVP48745 357 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 RIOX2Q8IUF8 465 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 TBC1D10CQ8IV04 446 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 ABRAQ8N0Z2 381 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 TRIB2Q92519 343 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 ISY1Q9ULR0 285 aaKnown RBP23.43■■□□□ 1.34
CMTM3-207ENST00000564060 TACC3Q9Y6A5 838 aa23.43■■□□□ 1.34
CMTM3-207ENST00000564060 NMT2O60551 498 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 ZBED4O75132 1171 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 HOXC6P09630 235 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 STAT3P40763 770 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 STAT2P52630 851 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 FAM160B2Q86V87 743 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 CHURC1Q8WUH1 139 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 NBPF3Q9H094 633 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 HMX1Q9NP08 348 aaPredicted RBP23.42■■□□□ 1.34
CMTM3-207ENST00000564060 BRCA2P51587 3418 aa23.42■■□□□ 1.34
CMTM3-207ENST00000564060 TOP1P11387 765 aaKnown RBP23.41■■□□□ 1.34
CMTM3-207ENST00000564060 CCDC178Q5BJE1 867 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 DPP9Q86TI2 863 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 IQCA1Q86XH1 822 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 U2AF1L4Q8WU68 220 aaKnown RBP23.41■■□□□ 1.34
CMTM3-207ENST00000564060 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 TTC14Q96N46 770 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 TEX13BQ9BXU2 312 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.41■■□□□ 1.346e-8■■■■■ 50.5
CMTM3-207ENST00000564060 CNNM2Q9H8M5 875 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms