RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
SPG7-209ENST00000564047 PDHBP11177 359 aa15.03■□□□□ -0
SPG7-209ENST00000564047 CDC27P30260 824 aa15.03■□□□□ -0
SPG7-209ENST00000564047 SLC4A3P48751 1232 aa15.03■□□□□ -0
SPG7-209ENST00000564047 KLRC3Q07444 240 aa15.03■□□□□ -0
SPG7-209ENST00000564047 RGMBQ6NW40 437 aa15.03■□□□□ -0
SPG7-209ENST00000564047 CPLX2Q6PUV4 134 aaKnown RBP15.03■□□□□ -0
SPG7-209ENST00000564047 CTU1Q7Z7A3 348 aaKnown RBP15.03■□□□□ -0
SPG7-209ENST00000564047 CCDC84Q86UT8 332 aaPredicted RBP15.03■□□□□ -0
SPG7-209ENST00000564047 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
SPG7-209ENST00000564047 C2orf69Q8N8R5 385 aa15.03■□□□□ -0
SPG7-209ENST00000564047 ZNF280CQ8ND82 737 aa15.03■□□□□ -0
SPG7-209ENST00000564047 DCAF4Q8WV16 495 aa15.03■□□□□ -0
SPG7-209ENST00000564047 CCDC102AQ96A19 550 aa15.03■□□□□ -0
SPG7-209ENST00000564047 KIAA1683Q9H0B3 1180 aa15.03■□□□□ -0
SPG7-209ENST00000564047 NCOA5Q9HCD5 579 aaKnown RBP15.03■□□□□ -0
SPG7-209ENST00000564047 GOPCQ9HD26 462 aa15.03■□□□□ -0
SPG7-209ENST00000564047 ZHX2Q9Y6X8 837 aa15.03■□□□□ -0
SPG7-209ENST00000564047 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
SPG7-209ENST00000564047 DOCK1Q14185 1865 aa15.02■□□□□ -0
SPG7-209ENST00000564047 PALM3A6NDB9 673 aaPredicted RBP15.02■□□□□ -0
SPG7-209ENST00000564047 USP17L10C9JJH3 530 aa15.02■□□□□ -0
SPG7-209ENST00000564047 UBE2Q2LH0YL09 131 aa15.02■□□□□ -0
SPG7-209ENST00000564047 CPLX1O14810 134 aa15.02■□□□□ -0
SPG7-209ENST00000564047 TRPA1O75762 1119 aa15.02■□□□□ -0
SPG7-209ENST00000564047 CDKL5O76039 1030 aa15.02■□□□□ -0
SPG7-209ENST00000564047 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
SPG7-209ENST00000564047 ADD1P35611 737 aaKnown RBP15.02■□□□□ -0
SPG7-209ENST00000564047 GNAQP50148 359 aa15.02■□□□□ -0
SPG7-209ENST00000564047 ASPRV1Q53RT3 343 aa15.02■□□□□ -0
SPG7-209ENST00000564047 SLFN13Q68D06 897 aa15.02■□□□□ -0
SPG7-209ENST00000564047 ERO1BQ86YB8 467 aa15.02■□□□□ -0
SPG7-209ENST00000564047 GMCL1Q96IK5 515 aa15.02■□□□□ -0
SPG7-209ENST00000564047 FEZ1Q99689 392 aa15.02■□□□□ -0
SPG7-209ENST00000564047 LZTS2Q9BRK4 669 aa15.02■□□□□ -0
SPG7-209ENST00000564047 VCPKMTQ9H867 229 aa15.02■□□□□ -0
SPG7-209ENST00000564047 AFG3L2Q9Y4W6 797 aa15.02■□□□□ -0
SPG7-209ENST00000564047 SPDYE5A6NIY4 337 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 CTDNEP1O95476 244 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 NDUFB10O96000 172 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 IFNAR1P17181 557 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 USP14P54578 494 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 BACE1P56817 501 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 PPATQ06203 517 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 SPP2Q13103 211 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 NTRK3Q16288 839 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 GPATCH4Q5T3I0 446 aaKnown RBP15.01□□□□□ -0.01
SPG7-209ENST00000564047 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 NSUN7Q8NE18 718 aaKnown RBP15.01□□□□□ -0.01
SPG7-209ENST00000564047 SMARCC2Q8TAQ2 1214 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 CLMNQ96JQ2 1002 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 ELP3Q9H9T3 547 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 RNF186Q9NXI6 227 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
SPG7-209ENST00000564047 C19orf81C9J6K1 198 aa15□□□□□ -0.01
SPG7-209ENST00000564047 SMARCA1P28370 1054 aa15□□□□□ -0.01
SPG7-209ENST00000564047 SLC1A4P43007 532 aa15□□□□□ -0.01
SPG7-209ENST00000564047 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
SPG7-209ENST00000564047 ZNF543Q08ER8 600 aa15□□□□□ -0.01
SPG7-209ENST00000564047 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
SPG7-209ENST00000564047 STAG2Q8N3U4 1231 aa15□□□□□ -0.01
SPG7-209ENST00000564047 LPAR1Q92633 364 aa15□□□□□ -0.01
SPG7-209ENST00000564047 SMC3Q9UQE7 1217 aa15□□□□□ -0.01
SPG7-209ENST00000564047 ATAD5Q96QE3 1844 aa15□□□□□ -0.01
SPG7-209ENST00000564047 PTPDC1A2A3K4 754 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 FAM155AB1AL88 458 aaPredicted RBP14.99□□□□□ -0.01
SPG7-209ENST00000564047 KLRF2D3W0D1 207 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 RAD21O60216 631 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 PLEKHA8P1O95397 391 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 BMP3P12645 472 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
SPG7-209ENST00000564047 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
SPG7-209ENST00000564047 FUT2Q10981 343 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 MTMR2Q13614 643 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 NBR1Q14596 966 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 CCDC96Q2M329 555 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 KIAA1755Q5JYT7 1200 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 RASGRP2Q7LDG7 609 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 SLC10A4Q96EP9 437 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
SPG7-209ENST00000564047 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
SPG7-209ENST00000564047 FRMPD2Q68DX3 1309 aaPredicted RBP14.98□□□□□ -0.01
SPG7-209ENST00000564047 TRIM75PA6NK02 468 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 CXCL11O14625 94 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 JAK2O60674 1132 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
SPG7-209ENST00000564047 GOLGA8HP0CJ92 632 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 PPIL2Q13356 520 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
SPG7-209ENST00000564047 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
SPG7-209ENST00000564047 NBPF11Q86T75 865 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 SRBD1Q8N5C6 995 aaKnown RBP14.98□□□□□ -0.01
SPG7-209ENST00000564047 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 OPTNQ96CV9 577 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms