RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PLXNB2O15031 1838 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 CNMDO75829 334 aa17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 HSPA4P34932 840 aa17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 KRT23Q9C075 422 aa17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 PNMA3Q9UL41 463 aa17.33■□□□□ 0.37
SCAMP2-203ENST00000563663 MCM4P33991 863 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.365e-11■□□□□ 8.8
SCAMP2-203ENST00000563663 ARHGAP39Q9C0H5 1083 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 GOPCQ9HD26 462 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 RBPJLQ9UBG7 517 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 MORF4L1Q9UBU8 362 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
SCAMP2-203ENST00000563663 FKTNO75072 461 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 SP3Q02447 781 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 FAM110CQ1W6H9 321 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 ADCK5Q3MIX3 580 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 FAM83BQ5T0W9 1011 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 COL13A1Q5TAT6 717 aaPredicted RBP17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 GMCL1Q96IK5 515 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 TTC14Q96N46 770 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 ZSCAN10Q96SZ4 725 aaPredicted RBP17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
SCAMP2-203ENST00000563663 TNKSO95271 1327 aa17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 SMCHD1A6NHR9 2005 aa17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 SNHG28P0DPA3 235 aa17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 TOP1P11387 765 aaKnown RBP17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 OSBPP22059 807 aa17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 LACTBP83111 547 aaPredicted RBP17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 SMCR8Q8TEV9 937 aaPredicted RBP17.31■□□□□ 0.36
SCAMP2-203ENST00000563663 GCLCP48506 637 aaPredicted RBP17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 NCOA7Q8NI08 942 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 SLFN13Q68D06 897 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 CD99L2Q8TCZ2 262 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
SCAMP2-203ENST00000563663 PDHBP11177 359 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 DSG3P32926 999 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 COG2Q14746 738 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 Q3C1V9 767 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 CHST3Q7LGC8 479 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 ATG4CQ96DT6 458 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 GPHNQ9NQX3 736 aaPredicted RBP17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 PPP1R9AQ9ULJ8 1098 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
SCAMP2-203ENST00000563663 PTMSP20962 102 aa17.28■□□□□ 0.36
SCAMP2-203ENST00000563663 MCCP23508 829 aa17.28■□□□□ 0.36
SCAMP2-203ENST00000563663 TRIM47Q96LD4 638 aa17.28■□□□□ 0.36
SCAMP2-203ENST00000563663 FLOT1O75955 427 aa17.28■□□□□ 0.36
SCAMP2-203ENST00000563663 DDX11L8A8MPP1 907 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 BMP3P12645 472 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 ERVK-9P63128 1117 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 ERVK-24P63145 666 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 TRDNQ13061 729 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 RNF20Q5VTR2 975 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 CLEC17AQ6ZS10 378 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 SPRYD3Q8NCJ5 442 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 PORCNQ9H237 461 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 LY9Q9HBG7 655 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.35
SCAMP2-203ENST00000563663 PLA2G6O60733 806 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 MKI67P46013 3256 aaKnown RBP17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 ZNF236Q9UL36 1845 aa17.26■□□□□ 0.35
SCAMP2-203ENST00000563663 VWA5AO00534 786 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 CD2BP2O95400 341 aaKnown RBP17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 SLC1A4P43007 532 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 ANAPC15P60006 121 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 TMEM132BQ14DG7 1078 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 BTNL9Q6UXG8 535 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 HOXC10Q9NYD6 342 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 PRC1O43663 620 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 RAD21O60216 631 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 ST18O60284 1047 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms